RNA–Protein interactions for RNA: ENST00000469498.1

GAPVD1-213, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 385 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-213ENST00000469498 SMG9Q9H0W8 520 aaKnown RBP8.74□□□□□ -1.01
GAPVD1-213ENST00000469498 UBE2ZQ9H832 354 aaPredicted RBP8.74□□□□□ -1.01
GAPVD1-213ENST00000469498 OLA1Q9NTK5 396 aaKnown RBP8.74□□□□□ -1.01
GAPVD1-213ENST00000469498 DDIT4Q9NX09 232 aa8.74□□□□□ -1.01
GAPVD1-213ENST00000469498 SMPD4Q9NXE4 827 aa8.74□□□□□ -1.01
GAPVD1-213ENST00000469498 MARCH2Q9P0N8 246 aa8.74□□□□□ -1.01
GAPVD1-213ENST00000469498 CALCOCO1Q9P1Z2 691 aa8.74□□□□□ -1.01
GAPVD1-213ENST00000469498 CD207Q9UJ71 328 aa8.74□□□□□ -1.01
GAPVD1-213ENST00000469498 MRPS23Q9Y3D9 190 aaKnown RBP8.74□□□□□ -1.01
GAPVD1-213ENST00000469498 REV3LO60673 3130 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 TRAV19A0A0A6YYK7 116 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 SLC12A8A0AV02 714 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 ZNF197O14709 1029 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 KIF5CO60282 957 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 LRCH4O75427 683 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 RNF8O76064 485 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 S1PR4O95977 384 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 COMTP21964 271 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 KCNA5P22460 613 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 FSHRP23945 695 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 MAN1A1P33908 653 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 RDXP35241 583 aaKnown RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 ATP5C1P36542 298 aaKnown RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 TUBP50607 506 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 DNA2P51530 1060 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 HDAC4P56524 1084 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 ITIH3Q06033 890 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 PIGHQ14442 188 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 ZNF569Q5MCW4 686 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 SNX30Q5VWJ9 437 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 SCYL2Q6P3W7 929 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 BEND5Q7L4P6 421 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 TADA2BQ86TJ2 420 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 FAM131BQ86XD5 332 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 SLC35F6Q8N357 371 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 RNF10Q8N5U6 811 aaKnown RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 NIPA2Q8N8Q9 360 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 LRRC57Q8N9N7 239 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 SMRP1Q8NCR6 262 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 FNIP1Q8TF40 1166 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 RNF34Q969K3 372 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 ACSF2Q96CM8 615 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 C16orf45Q96MC5 204 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 SERPINB11Q96P15 392 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 PEBP4Q96S96 227 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 CYP2S1Q96SQ9 504 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 CDK5RAP1Q96SZ6 601 aaKnown RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 RNF38Q9H0F5 515 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 S1PR5Q9H228 398 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 ADAM7Q9H2U9 754 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 POMKQ9H5K3 350 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 WDR6Q9NNW5 1121 aaKnown RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 TMPRSS4Q9NRS4 437 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 KCND1Q9NSA2 647 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 PIGVQ9NUD9 493 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 KLHL11Q9NVR0 708 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 RRN3Q9NYV6 651 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 PCSK1NQ9UHG2 260 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 PACSIN2Q9UNF0 486 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 USP15Q9Y4E8 981 aaPredicted RBP8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 CPQQ9Y646 472 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 ANKRD36A6QL64 1941 aa8.73□□□□□ -1.01
GAPVD1-213ENST00000469498 SCAMP3O14828 347 aaKnown RBP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 PRAMEF12O95522 483 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 OLFM2O95897 454 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 MOCS2O96007 188 aaPredicted RBP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 IGLV3-25P01717 112 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 HDCP19113 662 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 SP100P23497 879 aaPredicted RBP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 DDX6P26196 483 aaKnown RBP eCLIP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 MIPP30301 263 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 GBP1P32455 592 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 MTHFRP42898 656 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 MARCKSL1P49006 195 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 TBX4P57082 545 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 TAS2R40P59535 323 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 CBX2Q14781 532 aaPredicted RBP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 TRIP4Q15650 581 aaPredicted RBP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 SMTNL2Q2TAL5 461 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 ZC3H12AQ5D1E8 599 aaKnown RBP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 ATAT1Q5SQI0 421 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 CC2D1AQ6P1N0 951 aaPredicted RBP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 SND1Q7KZF4 910 aaKnown RBP eCLIP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 STRADAQ7RTN6 431 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 PEX26Q7Z412 305 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 NPAS3Q8IXF0 933 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 SYCE1Q8N0S2 351 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 ARFGAP1Q8N6T3 406 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 CCDC185Q8N715 623 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 CENPIQ92674 756 aaPredicted RBP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 NT5C3BQ969T7 300 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 FCRL2Q96LA5 508 aaPredicted RBP8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 RIPOR3Q96MK2 946 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 ZSWIM3Q96MP5 696 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 SLC46A2Q9BY10 475 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 TASP1Q9H6P5 420 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 ZWILCHQ9H900 591 aa8.72□□□□□ -1.01
GAPVD1-213ENST00000469498 GPATCH2LQ9NWQ4 482 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms