RNA–Protein interactions for RNA: ENST00000469129.1

SMC1A-205, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-205ENST00000469129 FBXW11Q9UKB1 542 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 SCML2Q9UQR0 700 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 FARP1Q9Y4F1 1045 aaPredicted RBP9.67□□□□□ -0.86
SMC1A-205ENST00000469129 PDE4DIPQ5VU43 2346 aa9.67□□□□□ -0.86
SMC1A-205ENST00000469129 DENND4CQ5VZ89 1909 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 NYNRINQ9P2P1 1898 aaKnown RBP9.66□□□□□ -0.86
SMC1A-205ENST00000469129 A0A087WUV0 522 aaPredicted RBP9.66□□□□□ -0.86
SMC1A-205ENST00000469129 MTMR11A4FU01 709 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 RGS16O15492 202 aaPredicted RBP9.66□□□□□ -0.86
SMC1A-205ENST00000469129 FGF10O15520 208 aaPredicted RBP9.66□□□□□ -0.86
SMC1A-205ENST00000469129 MTSS1O43312 755 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 CREB3O43889 395 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 MFSD11O43934 449 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 AGTP01019 485 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 IGLV3-25P01717 112 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 OR4Q2P0C623 313 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 ZSCAN5DPP0CG00 497 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 SLC2A3P11169 496 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 ETS1P14921 441 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 ATP2A2P16615 1042 aaKnown RBP9.66□□□□□ -0.86
SMC1A-205ENST00000469129 MX2P20592 715 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 MAGEA4P43358 317 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 MNX1P50219 401 aaPredicted RBP9.66□□□□□ -0.86
SMC1A-205ENST00000469129 PITX1P78337 314 aaPredicted RBP9.66□□□□□ -0.86
SMC1A-205ENST00000469129 SKOR1P84550 965 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 IFRD2Q12894 506 aaPredicted RBP9.66□□□□□ -0.86
SMC1A-205ENST00000469129 SEMA3BQ13214 749 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 DPYSQ14117 519 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 PPP2R5DQ14738 602 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 STAT4Q14765 748 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 TCTN1Q2MV58 587 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 USP41Q3LFD5 358 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 ACBD5Q5T8D3 534 aaPredicted RBP9.66□□□□□ -0.86
SMC1A-205ENST00000469129 MSANTD2Q6P1R3 559 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 ARHGEF18Q6ZSZ5 1173 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 MON1AQ86VX9 555 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 PDIK1LQ8N165 341 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 VPS52Q8N1B4 723 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 NAT8LQ8N9F0 302 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 ATP11CQ8NB49 1132 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 OR2W6PQ8NHA6 318 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 CPT1BQ92523 772 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 EDEM1Q92611 657 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 ARL8AQ96BM9 186 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 SPATA17Q96L03 361 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 GPR62Q9BZJ7 368 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 ADAM7Q9H2U9 754 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 SAYSD1Q9NPB0 183 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 CALCOCO1Q9P1Z2 691 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 STK39Q9UEW8 545 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 ANAPC1Q9H1A4 1944 aa9.66□□□□□ -0.86
SMC1A-205ENST00000469129 HELZP42694 1942 aaKnown RBP9.65□□□□□ -0.86
SMC1A-205ENST00000469129 C5orf60A6NFR6 353 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 RASGRF2O14827 1237 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 DCLK1O15075 740 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 GCATO75600 419 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 SPAG6O75602 509 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 TCEA3O75764 348 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 DGKIO75912 1065 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 BAIAP3O94812 1187 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 ACSL3O95573 720 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 LAG3P18627 525 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 TPSB2P20231 275 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 AMPD1P23109 780 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 YWHAQP27348 245 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 RBL1P28749 1068 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 CCR1P32246 355 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 FDFT1P37268 417 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 MAGEA6P43360 314 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 GLUD2P49448 558 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 RABGGTBP53611 331 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 SARNPP82979 210 aaKnown RBP9.65□□□□□ -0.86
SMC1A-205ENST00000469129 COG7P83436 770 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 GBE1Q04446 702 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 PDIA2Q13087 525 aaKnown RBP9.65□□□□□ -0.86
SMC1A-205ENST00000469129 KCNJ11Q14654 390 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 PRKD1Q15139 912 aaPredicted RBP9.65□□□□□ -0.86
SMC1A-205ENST00000469129 TPSAB1Q15661 275 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 PSMD5Q16401 504 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 MFSD5Q6N075 450 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 KCNT2Q6UVM3 1135 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 DENND5BQ6ZUT9 1274 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 TAOK1Q7L7X3 1001 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 UBE2Q1Q7Z7E8 422 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 CMTR2Q8IYT2 770 aaKnown RBP9.65□□□□□ -0.86
SMC1A-205ENST00000469129 PYROXD2Q8N2H3 581 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 TMEM199Q8N511 208 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 ADAM32Q8TC27 787 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 HTR3CQ8WXA8 447 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 ZNF558Q96NG5 402 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 SERPINB12Q96P63 405 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 HAPLN3Q96S86 360 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 CDK5RAP1Q96SZ6 601 aaKnown RBP9.65□□□□□ -0.86
SMC1A-205ENST00000469129 HERC2P3Q9BVR0 1158 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 TKTL2Q9H0I9 626 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 OSBPL2Q9H1P3 480 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 CNOT10Q9H9A5 744 aaKnown RBP9.65□□□□□ -0.86
SMC1A-205ENST00000469129 USP29Q9HBJ7 922 aa9.65□□□□□ -0.86
SMC1A-205ENST00000469129 TLR8Q9NR97 1041 aaKnown RBP9.65□□□□□ -0.86
SMC1A-205ENST00000469129 ETNK2Q9NVF9 386 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms