RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 LIMA1Q9UHB6 759 aaKnown RBP11.65□□□□□ -0.54
COL4A6-205ENST00000468338 RASAL2Q9UJF2 1139 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 STOML2Q9UJZ1 356 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 FBXO10Q9UK96 956 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 STRIP2Q9ULQ0 834 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 HBS1LQ9Y450 684 aaKnown RBP11.65□□□□□ -0.54
COL4A6-205ENST00000468338 FHOD1Q9Y613 1164 aa11.65□□□□□ -0.54
COL4A6-205ENST00000468338 SPAG17Q6Q759 2223 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 SDK1Q7Z5N4 2213 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 SLC12A8A0AV02 714 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 ANTXRLA6NF34 631 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 PAPSS1O43252 624 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-205ENST00000468338 SART1O43290 800 aaKnown RBP11.64□□□□□ -0.55
COL4A6-205ENST00000468338 THAP12O43422 761 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 TULP3O75386 442 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 S1PR4O95977 384 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 PENKP01210 267 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-205ENST00000468338 IGLV3-27P01718 113 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 LMNAP02545 664 aaKnown RBP11.64□□□□□ -0.55
COL4A6-205ENST00000468338 HOXC13P31276 330 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 CHKAP35790 457 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 TNFRSF4P43489 277 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 KIR2DL1P43626 348 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-205ENST00000468338 MRPS21P82921 87 aaKnown RBP11.64□□□□□ -0.55
COL4A6-205ENST00000468338 DMWDQ09019 674 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 PDCLQ13371 301 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 DRAP1Q14919 205 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-205ENST00000468338 HSF5Q4G112 596 aaPredicted RBP11.64□□□□□ -0.55
COL4A6-205ENST00000468338 C4orf48Q5BLP8 95 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 RSRC2Q7L4I2 434 aaKnown RBP11.64□□□□□ -0.55
COL4A6-205ENST00000468338 SLC47A2Q86VL8 602 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 FMNL3Q8IVF7 1028 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 SFTPA1Q8IWL2 248 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 CAMKK1Q8N5S9 505 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 RNF139Q8WU17 664 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 ATRIPQ8WXE1 791 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 EDEM1Q92611 657 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 BPIFA3Q9BQP9 254 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 FUCA2Q9BTY2 467 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 C1QTNF2Q9BXJ5 285 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 STK33Q9BYT3 514 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 VPS16Q9H269 839 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 GANQ9H2C0 597 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 EPC1Q9H2F5 836 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 ARHGEF4Q9NR80 690 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 WDR35Q9P2L0 1181 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 SFMBT1Q9UHJ3 866 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 AGO1Q9UL18 857 aaKnown RBP11.64□□□□□ -0.55
COL4A6-205ENST00000468338 STARD13Q9Y3M8 1113 aa11.64□□□□□ -0.55
COL4A6-205ENST00000468338 PIK3R2O00459 728 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 ZBTB24O43167 697 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-205ENST00000468338 LATS1O95835 1130 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 APODP05090 189 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 CISD3P0C7P0 127 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 PNMA6AP0CW24 399 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-205ENST00000468338 TYRP14679 529 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 CORO1AP31146 461 aaKnown RBP11.63□□□□□ -0.55
COL4A6-205ENST00000468338 CDH5P33151 784 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-205ENST00000468338 CNR2P34972 360 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 USP8P40818 1118 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 COPB1P53618 953 aaKnown RBP11.63□□□□□ -0.55
COL4A6-205ENST00000468338 BPIFB4P59827 614 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 RING1Q06587 406 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 NNTQ13423 1086 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 EIF4EBP2Q13542 120 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-205ENST00000468338 ANO4Q32M45 955 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 PREPLQ4J6C6 727 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-205ENST00000468338 LCE2DQ5TA82 110 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-205ENST00000468338 FYB2Q5VWT5 728 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 WDR5BQ86VZ2 330 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 LONP2Q86WA8 852 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 DENND1CQ8IV53 801 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 NAT16Q8N8M0 369 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 TERB1Q8NA31 727 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 RPLP0P6Q8NHW5 317 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 DDX1Q92499 740 aaKnown RBP11.63□□□□□ -0.55
COL4A6-205ENST00000468338 AZIN2Q96A70 460 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 ACDQ96AP0 544 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 BBS2Q9BXC9 721 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 POLR3BQ9NW08 1133 aaPredicted RBP11.63□□□□□ -0.55
COL4A6-205ENST00000468338 DEC1Q9P2X7 70 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 EGFL7Q9UHF1 273 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 HCN2Q9UL51 889 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 SIK3Q9Y2K2 1263 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 DAAM1Q9Y4D1 1078 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 EML5Q05BV3 1969 aa11.63□□□□□ -0.55
COL4A6-205ENST00000468338 LGALS16A8MUM7 142 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 E5RJQ4 531 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 TRIM24O15164 1050 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 IGLV3-25P01717 112 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 GLI1P08151 1106 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 HMBSP08397 361 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 CYP11B1P15538 503 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 FNTBP49356 437 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 DMC1Q14565 340 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 KLHL40Q2TBA0 621 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 RNF43Q68DV7 783 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 TPGS1Q6ZTW0 290 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 IL17RCQ8NAC3 791 aa11.62□□□□□ -0.55
COL4A6-205ENST00000468338 SLC39A13Q96H72 371 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms