RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 TEX28O15482 410 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 TBX18O95935 607 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 ZFXP17010 805 aaPredicted RBP21.31■■□□□ 1
TMEM53-207ENST00000468117 SLC10A2Q12908 348 aaPredicted RBP21.31■■□□□ 1
TMEM53-207ENST00000468117 CALCOCO2Q13137 446 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 RFX8Q6ZV50 586 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 TSEN2Q8NCE0 465 aaKnown RBP21.31■■□□□ 1
TMEM53-207ENST00000468117 ART4Q93070 314 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 ZBP1Q9H171 429 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 MTPAPQ9NVV4 582 aaKnown RBP eCLIP21.31■■□□□ 1
TMEM53-207ENST00000468117 COMMD8Q9NX08 183 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 CLIC5Q9NZA1 410 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 WHRNQ9P202 907 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 OR12D3Q9UGF7 316 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 CHD9Q3L8U1 2897 aa21.31■■□□□ 1
TMEM53-207ENST00000468117 H7C0C1 242 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 CCR1P32246 355 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 ATP5OP48047 213 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 PSEN1P49768 467 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 EFEMP1Q12805 493 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 MSANTD2Q6P1R3 559 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 DARS2Q6PI48 645 aaKnown RBP21.3■■□□□ 1
TMEM53-207ENST00000468117 CCDC33Q8N5R6 958 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 LRRN4Q8WUT4 740 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 RSAD2Q8WXG1 361 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 SERPINB11Q96P15 392 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 TTLL2Q9BWV7 592 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 ARHGEF38Q9NXL2 777 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 HSFX1Q9UBD0 423 aa21.3■■□□□ 1
TMEM53-207ENST00000468117 LILRB3O75022 631 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 DPYSQ14117 519 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 P3H1Q32P28 736 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 BRMS1LQ5PSV4 323 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 FAM71DQ8N9W8 422 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 SP7Q8TDD2 431 aaPredicted RBP21.29■■□□□ 1
TMEM53-207ENST00000468117 HTATIP2Q9BUP3 242 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 HPCAL4Q9UM19 191 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 YIPF1Q9Y548 306 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 CTSAP10619 480 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 ITIH2P19823 946 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 ITGA8P53708 1063 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 NRLP54845 237 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 TPI1P60174 286 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 PHOSPHO2Q8TCD6 241 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 CEP295NLQ96MC4 621 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 LBHD1Q9BQE6 289 aaPredicted RBP21.29■■□□□ 1
TMEM53-207ENST00000468117 SIK2Q9H0K1 926 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 PCDH9Q9HC56 1237 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.29■■□□□ 1
TMEM53-207ENST00000468117 DTLQ9NZJ0 730 aa21.29■■□□□ 1
TMEM53-207ENST00000468117 PRRG1O14668 218 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 ZDHHC11BP0C7U3 371 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 ALDH1A3P47895 512 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 GPS1Q13098 491 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 PPP2R5DQ14738 602 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 C10orf120Q5SQS8 335 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 FAM182AQ5T1J6 154 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 NETO2Q8NC67 525 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 CCHCR1Q8TD31 782 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 CCSER2Q9H7U1 834 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 FNIP2Q9P278 1114 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 TLR6Q9Y2C9 796 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 CDH23Q9H251 3354 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 MYO7AQ13402 2215 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 ANAPC1Q9H1A4 1944 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 MFSD11O43934 449 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 PAGE1O75459 146 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 LRIG2O94898 1065 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 CSPG5O95196 566 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 MOCS2O96007 188 aaPredicted RBP21.28■■□□□ 1
TMEM53-207ENST00000468117 CNPP09543 421 aaKnown RBP21.28■■□□□ 1
TMEM53-207ENST00000468117 SPATA31D3P0C874 917 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 NR2C2P49116 596 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 SPATA31D4Q6ZUB0 917 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 MIB1Q86YT6 1006 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 EPAS1Q99814 870 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 UBE2OQ9C0C9 1292 aaKnown RBP21.28■■□□□ 1
TMEM53-207ENST00000468117 ALG13Q9NP73 1137 aaKnown RBP21.28■■□□□ 1
TMEM53-207ENST00000468117 STK39Q9UEW8 545 aa21.28■■□□□ 1
TMEM53-207ENST00000468117 XPO7Q9UIA9 1087 aaKnown RBP21.28■■□□□ 1
TMEM53-207ENST00000468117 GBF1Q92538 1859 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 HMGA1P17096 107 aaKnown RBP21.27■■□□□ 1
TMEM53-207ENST00000468117 ERCC2P18074 760 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 ELF1P32519 619 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 HSPA9P38646 679 aaKnown RBP21.27■■□□□ 1
TMEM53-207ENST00000468117 DHX9Q08211 1270 aaKnown RBP21.27■■□□□ 1
TMEM53-207ENST00000468117 IZUMO3Q5VZ72 239 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 TMC7Q7Z402 723 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 TMC3Q7Z5M5 1100 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 MREGQ8N565 214 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 DPF3Q92784 378 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 ZNF512Q96ME7 567 aaPredicted RBP21.27■■□□□ 1
TMEM53-207ENST00000468117 OSBPL2Q9H1P3 480 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 USP29Q9HBJ7 922 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 RXFP1Q9HBX9 757 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 MTRF1LQ9UGC7 380 aaKnown RBP21.27■■□□□ 1
TMEM53-207ENST00000468117 ANAPC5Q9UJX4 755 aa21.27■■□□□ 1
TMEM53-207ENST00000468117 MYO18AQ92614 2054 aaKnown RBP21.26■□□□□ 0.99
TMEM53-207ENST00000468117 KCNU1A8MYU2 1149 aa21.26■□□□□ 0.99
TMEM53-207ENST00000468117 DCLK1O15075 740 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms