RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PDE11AQ9HCR9 933 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 SATB2Q9UPW6 733 aa10.77□□□□□ -0.69
HDAC3-203ENST00000467533 NYNRINQ9P2P1 1898 aaKnown RBP10.76□□□□□ -0.69
HDAC3-203ENST00000467533 AHCTF1Q8WYP5 2266 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 A0A1W2PR77 199 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 A8MXQ7 604 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 MDM4O15151 490 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 EPB41L2O43491 1005 aaKnown RBP10.76□□□□□ -0.69
HDAC3-203ENST00000467533 SIGLEC6O43699 453 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 OPA1O60313 960 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 PRPF6O94906 941 aaKnown RBP10.76□□□□□ -0.69
HDAC3-203ENST00000467533 LDHAP00338 332 aaKnown RBP10.76□□□□□ -0.69
HDAC3-203ENST00000467533 CYBBP04839 570 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 FAM87AP0C7U9 286 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 RXRGP48443 463 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 PGFP49763 221 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 ASIC1P78348 528 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 ZNF776Q68DI1 518 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-203ENST00000467533 NCEH1Q6PIU2 408 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 XKR5Q6UX68 686 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 KANSL1Q7Z3B3 1105 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 RBBP8NLQ8NC74 664 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-203ENST00000467533 EXTL1Q92935 676 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 HVCN1Q96D96 273 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 CCNL2Q96S94 520 aaPredicted RBP10.76□□□□□ -0.69
HDAC3-203ENST00000467533 EBF2Q9HAK2 575 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 COMMD8Q9NX08 183 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 SRPK3Q9UPE1 567 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 MAN2B2Q9Y2E5 1009 aa10.76□□□□□ -0.69
HDAC3-203ENST00000467533 FAM92AA1XBS5 289 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 LRRC72A6NJI9 287 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 TLR4O00206 839 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 TRIM38O00635 465 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 WNT9AO14904 365 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 CYP26A1O43174 497 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 PPFIA2O75334 1257 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 TACC1O75410 805 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 KRT38O76015 456 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 SFTPCP11686 197 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 CHKAP35790 457 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 AFMP43652 599 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 CCR10P46092 362 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 GALCP54803 685 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 TNNC1P63316 161 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 SKOR1P84550 965 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 CLN3Q13286 438 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 ARL13BQ3SXY8 428 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 TMEM215Q68D42 235 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 FOXR1Q6PIV2 292 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 IGF2-ASQ6U949 168 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 USP53Q70EK8 1073 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 TMC6Q7Z403 805 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 OR5B17Q8NGF7 314 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 CYB5D2Q8WUJ1 264 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 GOLGA1Q92805 767 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 HPS3Q969F9 1004 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 SMARCD1Q96GM5 515 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 SERAC1Q96JX3 654 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 TMEM245Q9H330 911 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 ST6GALNAC4Q9H4F1 302 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 FBXO44Q9H4M3 255 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 ERVMER34-1Q9H9K5 563 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 CYLDQ9NQC7 956 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 KRT82Q9NSB4 513 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 INTS13Q9NVM9 706 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 FBXL12Q9NXK8 326 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 IL37Q9NZH6 218 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 HSPBP1Q9NZL4 362 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 NUDT5Q9UKK9 219 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 PLA2G4CQ9UP65 541 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 EXOC7Q9UPT5 735 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 ZNF510Q9Y2H8 683 aa10.75□□□□□ -0.69
HDAC3-203ENST00000467533 A0A1B0GVM2 712 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 BLACEA4D250 179 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 VWA3AA6NCI4 1184 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 TIMM44O43615 452 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 AP1G2O75843 785 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 STC2O76061 302 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 ITGB6P18564 788 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 PLA2G4AP47712 749 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 TOB1P50616 345 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-203ENST00000467533 ZNF211Q13398 564 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-203ENST00000467533 MCM6Q14566 821 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 C10orf120Q5SQS8 335 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 USP30Q70CQ3 517 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 SFR1Q86XK3 245 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 DDI1Q8WTU0 396 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 ABCG4Q9H172 646 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 OSBPL2Q9H1P3 480 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 PABPC3Q9H361 631 aaKnown RBP10.74□□□□□ -0.69
HDAC3-203ENST00000467533 PRSS16Q9NQE7 514 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 OSER1Q9NX31 292 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 SERGEFQ9UGK8 458 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 CLEC4EQ9ULY5 219 aa10.74□□□□□ -0.69
HDAC3-203ENST00000467533 ARID1BQ8NFD5 2236 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-203ENST00000467533 COL27A1Q8IZC6 1860 aaPredicted RBP10.74□□□□□ -0.69
HDAC3-203ENST00000467533 A0A1W2PP55 124 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 FFAR2O15552 330 aa10.73□□□□□ -0.69
HDAC3-203ENST00000467533 RNASEH2AO75792 299 aaKnown RBP10.73□□□□□ -0.69
HDAC3-203ENST00000467533 CLSTN1O94985 981 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms