RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 NEUROD6Q96NK8 337 aa4.7□□□□□ -1.66
SMC4-208ENST00000467468 WDR24Q96S15 920 aa4.7□□□□□ -1.66
SMC4-208ENST00000467468 AGXT2Q9BYV1 514 aa4.7□□□□□ -1.66
SMC4-208ENST00000467468 ELAC1Q9H777 363 aaKnown RBP4.7□□□□□ -1.66
SMC4-208ENST00000467468 FSCN3Q9NQT6 498 aa4.7□□□□□ -1.66
SMC4-208ENST00000467468 NDUFAF4Q9P032 175 aa4.7□□□□□ -1.66
SMC4-208ENST00000467468 DKK3Q9UBP4 350 aa4.7□□□□□ -1.66
SMC4-208ENST00000467468 NFU1Q9UMS0 254 aa4.7□□□□□ -1.66
SMC4-208ENST00000467468 MRPS17Q9Y2R5 130 aaKnown RBP4.7□□□□□ -1.66
SMC4-208ENST00000467468 DYTNA2CJ06 578 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 E7EVH7 732 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 ZSCAN9O15535 394 aaPredicted RBP4.69□□□□□ -1.66
SMC4-208ENST00000467468 PPP6R2O75170 966 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 TAF5LO75529 589 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 C1QL1O75973 258 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 TFRCP02786 760 aaKnown RBP4.69□□□□□ -1.66
SMC4-208ENST00000467468 CSF1RP07333 972 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 PDHA1P08559 390 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 ELFN1P0C7U0 828 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 HGFP14210 728 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 RXRAP19793 462 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 CLCN2P51788 898 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 PGDP52209 483 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 TPTEP56180 551 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 TIAL1Q01085 375 aaKnown RBP eCLIP4.69□□□□□ -1.66
SMC4-208ENST00000467468 FHL3Q13643 280 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 CCNIQ14094 377 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 AARS2Q5JTZ9 985 aaKnown RBP4.69□□□□□ -1.66
SMC4-208ENST00000467468 TREML2Q5T2D2 321 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 FCRLBQ6BAA4 426 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 SLC29A4Q7RTT9 530 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 MAVSQ7Z434 540 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 AMIGO2Q86SJ2 522 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 TTC30AQ86WT1 665 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 CCDC89Q8N998 374 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 OSCP1Q8WVF1 389 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 RFFLQ8WZ73 363 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 CPT1BQ92523 772 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 CENPIQ92674 756 aaPredicted RBP4.69□□□□□ -1.66
SMC4-208ENST00000467468 C3orf49Q96BT1 292 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 NOD2Q9HC29 1040 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 GBA2Q9HCG7 927 aaPredicted RBP4.69□□□□□ -1.66
SMC4-208ENST00000467468 CNTN6Q9UQ52 1028 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 SSX2IPQ9Y2D8 614 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 DERAQ9Y315 318 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 RABGAP1Q9Y3P9 1069 aa4.69□□□□□ -1.66
SMC4-208ENST00000467468 COL15A1P39059 1388 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 LRRC3CA6NJW4 275 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 CBFA2T3O75081 653 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 RPP40O75818 363 aaKnown RBP4.68□□□□□ -1.66
SMC4-208ENST00000467468 IL6RP08887 468 aaPredicted RBP4.68□□□□□ -1.66
SMC4-208ENST00000467468 DLDP09622 509 aaKnown RBP4.68□□□□□ -1.66
SMC4-208ENST00000467468 NPSP0C0P6 89 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 ITPKBP27987 946 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 RBL1P28749 1068 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 SERPINA4P29622 427 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 UQCRC1P31930 480 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 HTR7P34969 479 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 ATXN1P54253 815 aaKnown RBP4.68□□□□□ -1.66
SMC4-208ENST00000467468 PDE1AP54750 535 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 EEFSECP57772 596 aaKnown RBP4.68□□□□□ -1.66
SMC4-208ENST00000467468 PRKG2Q13237 762 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 CSHL1Q14406 222 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 CLCA4Q14CN2 919 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 ANKRD1Q15327 319 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 GPATCH4Q5T3I0 446 aaKnown RBP4.68□□□□□ -1.66
SMC4-208ENST00000467468 TRABD2AQ86V40 505 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 USP38Q8NB14 1042 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 HASPINQ8TF76 798 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 GOLGA1Q92805 767 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 GLG1Q92896 1179 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 HVCN1Q96D96 273 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 RRP36Q96EU6 259 aaKnown RBP4.68□□□□□ -1.66
SMC4-208ENST00000467468 HIST1H2AAQ96QV6 131 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 REEP2Q9BRK0 252 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 KRTAP17-1Q9BYP8 105 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 GPR63Q9BZJ6 419 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 PREBQ9HCU5 417 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 CCNL1Q9UK58 526 aaPredicted RBP4.68□□□□□ -1.66
SMC4-208ENST00000467468 SLC45A1Q9Y2W3 748 aa4.68□□□□□ -1.66
SMC4-208ENST00000467468 RRP7AQ9Y3A4 280 aaKnown RBP4.68□□□□□ -1.66
SMC4-208ENST00000467468 FNDC1Q4ZHG4 1894 aaPredicted RBP4.68□□□□□ -1.66
SMC4-208ENST00000467468 A0A087X0M5 115 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 A0A1B0GX30 115 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 GXYLT2A0PJZ3 443 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 A1L4Q6 167 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 FAM90A20PA6NIJ5 464 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 K7ENM7 598 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 AGPSO00116 658 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 JTBO76095 146 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 FESP07332 822 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 HNRNPCP07910 306 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMC4-208ENST00000467468 PCSK6P29122 969 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 EPHA3P29320 983 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 NTSR1P30989 418 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 PRKAR1BP31321 381 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 CYP2C18P33260 490 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 LIPAP38571 399 aa4.67□□□□□ -1.66
SMC4-208ENST00000467468 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.67□□□□□ -1.66
SMC4-208ENST00000467468 RPS6KA2Q15349 733 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms