RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 ABCC13Q9NSE7 274 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 PCDHB4Q9Y5E5 795 aa20.01■□□□□ 0.79
COL9A3-206ENST00000466532 CEP295Q9C0D2 2601 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 TSPAN3O60637 253 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 PAEPP09466 180 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 CD6P30203 668 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 ARID5AQ03989 594 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 SEMA3BQ13214 749 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 PKDCCQ504Y2 493 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 SYCP2LQ5T4T6 812 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 LCLAT1Q6UWP7 414 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 MINDY1Q8N5J2 469 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 SORCS1Q8WY21 1168 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 TFAP2BQ92481 460 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 FOXJ1Q92949 421 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 CNGB3Q9NQW8 809 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 MAN1B1Q9UKM7 699 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 TP53BP1Q12888 1972 aaPredicted RBP20■□□□□ 0.79
COL9A3-206ENST00000466532 FRYQ5TBA9 3013 aa20■□□□□ 0.79
COL9A3-206ENST00000466532 NYNRINQ9P2P1 1898 aaKnown RBP20■□□□□ 0.79
COL9A3-206ENST00000466532 ARHGAP33O14559 1287 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 MSI1O43347 362 aaKnown RBP19.99■□□□□ 0.79
COL9A3-206ENST00000466532 OPHN1O60890 802 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 SYPP08247 313 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 CD44P16070 742 aaKnown RBP19.99■□□□□ 0.79
COL9A3-206ENST00000466532 PRKCHP24723 683 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 HOXD9P28356 352 aaPredicted RBP19.99■□□□□ 0.79
COL9A3-206ENST00000466532 PPP1R2P41236 205 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 RGS7P49802 495 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 DAOAP59103 153 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 ZNF445P59923 1031 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 WDR45BQ5MNZ6 344 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 TMEM215Q68D42 235 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 KLHL10Q6JEL2 608 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 TMPRSS6Q8IU80 811 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 SCML4Q8N228 414 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 PPM1KQ8N3J5 372 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 RBBP8NLQ8NC74 664 aaPredicted RBP19.99■□□□□ 0.79
COL9A3-206ENST00000466532 TOE1Q96GM8 510 aaKnown RBP19.99■□□□□ 0.79
COL9A3-206ENST00000466532 ITM2CQ9NQX7 267 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 WSB2Q9NYS7 404 aaPredicted RBP19.99■□□□□ 0.79
COL9A3-206ENST00000466532 USP36Q9P275 1121 aaKnown RBP19.99■□□□□ 0.79
COL9A3-206ENST00000466532 SUSD2Q9UGT4 822 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 TMEM131Q92545 1883 aa19.99■□□□□ 0.79
COL9A3-206ENST00000466532 MEI4A8MW99 385 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 UPK3BL1B0FP48 263 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 UPK3BL2E5RIL1 263 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 M0QYV0 167 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 PIK3R2O00459 728 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 PMM2O15305 246 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 TIMM44O43615 452 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 LATS1O95835 1130 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 TOP3BO95985 862 aaKnown RBP19.98■□□□□ 0.79
COL9A3-206ENST00000466532 EPHX1P07099 455 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 SPINK2P20155 84 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 MAOBP27338 520 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 NUMA1Q14980 2115 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 PLEKHG6Q3KR16 790 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 PMF1Q6P1K2 205 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 SERPINA13PQ6UXR4 307 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 PIP4P1Q86T03 277 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 OR2I1PQ8NGU4 316 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 SLC35F5Q8WV83 523 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 PRCCQ92733 491 aaPredicted RBP19.98■□□□□ 0.79
COL9A3-206ENST00000466532 KAT5Q92993 513 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 SIPA1Q96FS4 1042 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 GPR174Q9BXC1 333 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 STOML2Q9UJZ1 356 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.98■□□□□ 0.79
COL9A3-206ENST00000466532 WASF3Q9UPY6 502 aa19.98■□□□□ 0.79
COL9A3-206ENST00000466532 KCNJ18B7U540 433 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 RNF225M0QZC1 329 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-206ENST00000466532 NCAM1P13591 858 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 GNSP15586 552 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 BRD2P25440 801 aaKnown RBP19.97■□□□□ 0.79
COL9A3-206ENST00000466532 HLA-FP30511 346 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 TPMTP51580 245 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 COPAP53621 1224 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 CETN1Q12798 172 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 CNGA2Q16280 664 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 ADGRF1Q5T601 910 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 MSANTD2Q6P1R3 559 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 CACUL1Q86Y37 369 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 ELOA2Q8IYF1 753 aaPredicted RBP19.97■□□□□ 0.79
COL9A3-206ENST00000466532 IRGQQ8WZA9 623 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 TMA16Q96EY4 203 aaKnown RBP19.97■□□□□ 0.79
COL9A3-206ENST00000466532 ZSWIM1Q9BR11 485 aa19.97■□□□□ 0.79
COL9A3-206ENST00000466532 SPAARA0A1B0GVQ0 90 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 C1QTNF9BB2RNN3 333 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 GABBR2O75899 941 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 PROS1P07225 676 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 C1QTNF9P0C862 333 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 ACADMP11310 421 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 HLA-EP13747 358 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 OXTRP30559 389 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 STILQ15468 1287 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 TTI2Q6NXR4 508 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 UNQ6494/PRO21346Q6UXR6 183 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 CHST9Q7L1S5 443 aa19.96■□□□□ 0.79
COL9A3-206ENST00000466532 RRAGAQ7L523 313 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms