RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 RFX8Q6ZV50 586 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 PSTKQ8IV42 348 aaKnown RBP14.01□□□□□ -0.17
UBE4B-206ENST00000466379 SCN4BQ8IWT1 228 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 TFB1MQ8WVM0 346 aaKnown RBP14.01□□□□□ -0.17
UBE4B-206ENST00000466379 MAML1Q92585 1016 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 B3GALT6Q96L58 329 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 FAM193BQ96PV7 902 aaPredicted RBP14.01□□□□□ -0.17
UBE4B-206ENST00000466379 KLC2Q9H0B6 622 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 KIF9Q9HAQ2 790 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 RCOR3Q9P2K3 495 aaPredicted RBP14.01□□□□□ -0.17
UBE4B-206ENST00000466379 FBXW11Q9UKB1 542 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 RASA4BC9J798 803 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 RASA4O43374 803 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 GPR15P49685 360 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 SLC5A3P53794 718 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 PM20D1Q6GTS8 502 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 DENND5BQ6ZUT9 1274 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 HTR3CQ8WXA8 447 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 COLEC11Q9BWP8 271 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 TKTL2Q9H0I9 626 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 ABI2Q9NYB9 513 aaPredicted RBP14.01□□□□□ -0.17
UBE4B-206ENST00000466379 SEPT10Q9P0V9 454 aa14.01□□□□□ -0.17
UBE4B-206ENST00000466379 SMAPO00193 183 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 DCLK1O15075 740 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 GCATO75600 419 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 FAM107AO95990 144 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 ERCC2P18074 760 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 TPI1P60174 286 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 SF3A3Q12874 501 aaKnown RBP eCLIP14□□□□□ -0.17
UBE4B-206ENST00000466379 ARHGEF18Q6ZSZ5 1173 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 CEP57Q86XR8 500 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 FAM126BQ8IXS8 530 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 CCNYQ8ND76 341 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 DQX1Q8TE96 717 aaKnown RBP14□□□□□ -0.17
UBE4B-206ENST00000466379 CENPTQ96BT3 561 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 CFAP36Q96G28 342 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 PGLYRP2Q96PD5 576 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 PHACTR1Q9C0D0 580 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 NUDT5Q9UKK9 219 aa14□□□□□ -0.17
UBE4B-206ENST00000466379 TTC3P53804 2025 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 ENPP3O14638 875 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 SPAG7O75391 227 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 TADA2AO75478 443 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 PHBP35232 272 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 GRIA1P42261 906 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 CDK7P50613 346 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 YWHAGP61981 247 aaKnown RBP eCLIP13.99□□□□□ -0.17
UBE4B-206ENST00000466379 MAPRE1Q15691 268 aaKnown RBP13.99□□□□□ -0.17
UBE4B-206ENST00000466379 TADA2BQ86TJ2 420 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 CAND1Q86VP6 1230 aaKnown RBP13.99□□□□□ -0.17
UBE4B-206ENST00000466379 VPS52Q8N1B4 723 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 IRGQQ8WZA9 623 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 RNF34Q969K3 372 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 NTAN1Q96AB6 310 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 PGAP3Q96FM1 320 aaPredicted RBP13.99□□□□□ -0.17
UBE4B-206ENST00000466379 SLC9A7Q96T83 725 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 TRIM56Q9BRZ2 755 aaKnown RBP13.99□□□□□ -0.17
UBE4B-206ENST00000466379 WDCPQ9H6R7 721 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 TMEM161AQ9NX61 479 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 MRPL42Q9Y6G3 142 aaKnown RBP13.99□□□□□ -0.17
UBE4B-206ENST00000466379 TEX264Q9Y6I9 313 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 PATJQ8NI35 1801 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 C5orf60A6NFR6 353 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 PQBP1O60828 265 aaKnown RBP13.99□□□□□ -0.17
UBE4B-206ENST00000466379 KRT15P19012 456 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 PBX3P40426 434 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 SCAPQ12770 1279 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 SEMA3BQ13214 749 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 MTFR1Q15390 333 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 ANKRD20A2Q5SQ80 823 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 ANKRD20A1Q5TYW2 823 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 ANKRD20A3Q5VUR7 823 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 C4orf50Q6ZRC1 276 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 ZNF534Q76KX8 674 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 TRABD2AQ86V40 505 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 TAX1BP1Q86VP1 789 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 RIBC1Q8N443 379 aaPredicted RBP13.99□□□□□ -0.17
UBE4B-206ENST00000466379 NPWQ8N729 165 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 TET1Q8NFU7 2136 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 GDAP1Q8TB36 358 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 P2RY11Q96G91 374 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 FTHL17Q9BXU8 183 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 PRDM12Q9H4Q4 367 aa13.99□□□□□ -0.17
UBE4B-206ENST00000466379 VWA8A3KMH1 1905 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 A0A1W2PPM1 405 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 ARHGEF37A1IGU5 675 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 SRRM3A6NNA2 597 aaPredicted RBP13.98□□□□□ -0.17
UBE4B-206ENST00000466379 RNF103O00237 685 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 EBAG9O00559 213 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 MSI1O43347 362 aaKnown RBP13.98□□□□□ -0.17
UBE4B-206ENST00000466379 PAX3P23760 479 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 CXCR3P49682 368 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 GEMIN4P57678 1058 aaKnown RBP13.98□□□□□ -0.17
UBE4B-206ENST00000466379 PAFAH1B3Q15102 231 aaKnown RBP13.98□□□□□ -0.17
UBE4B-206ENST00000466379 PRKD1Q15139 912 aaPredicted RBP13.98□□□□□ -0.17
UBE4B-206ENST00000466379 DDR2Q16832 855 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 PPP1R21Q6ZMI0 780 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 TDRPQ86YL5 185 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 ABI1Q8IZP0 508 aa13.98□□□□□ -0.17
UBE4B-206ENST00000466379 C4orf33Q8N1A6 199 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms