RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 ACTN2P35609 894 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 AVPR1AP37288 418 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 TMPRSS3P57727 454 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 PTENP60484 403 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 PSMC5P62195 406 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 TLE3Q04726 772 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 POU5F1BQ06416 359 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 BFSP1Q12934 665 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 NR1I3Q14994 352 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 UGCGQ16739 394 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 CTXN3Q4LDR2 81 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 MIER3Q7Z3K6 550 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 APPL2Q8NEU8 664 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 OR2I1PQ8NGU4 316 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 NCOA7Q8NI08 942 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 USP33Q8TEY7 942 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 RILPL2Q969X0 211 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 TMEM143Q96AN5 459 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 CHFRQ96EP1 664 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 TMEM176AQ96HP8 235 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 CEP170P1Q96L14 293 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 KIF9Q9HAQ2 790 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 GP6Q9HCN6 339 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 DIAPH3Q9NSV4 1193 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 CACNG4Q9UBN1 327 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 MMP17Q9ULZ9 603 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 TBX20Q9UMR3 447 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 CACNA1EQ15878 2313 aa6.37□□□□□ -1.39
NCL-208ENST00000466274 CCDC69A6NI79 296 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 TLX3O43711 291 aaPredicted RBP6.36□□□□□ -1.39
NCL-208ENST00000466274 PLEKHA8P1O95397 391 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 CELA3BP08861 270 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 ATXN1LP0C7T5 689 aaKnown RBP6.36□□□□□ -1.39
NCL-208ENST00000466274 ARF4P18085 180 aaPredicted RBP6.36□□□□□ -1.39
NCL-208ENST00000466274 MARCKSP29966 332 aaPredicted RBP6.36□□□□□ -1.39
NCL-208ENST00000466274 CIITAP33076 1130 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 GJA4P35212 333 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 MRPS21P82921 87 aaKnown RBP6.36□□□□□ -1.39
NCL-208ENST00000466274 LY6DQ14210 128 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 WDR45BQ5MNZ6 344 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 EOGTQ5NDL2 527 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 LRCH2Q5VUJ6 765 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 JAKMIP3Q5VZ66 844 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 BICRALQ6AI39 1079 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 WWC2Q6AWC2 1192 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 ZNF280DQ6N043 979 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 CASC1Q6TDU7 716 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 CWC27Q6UX04 472 aaKnown RBP6.36□□□□□ -1.39
NCL-208ENST00000466274 OTUD6AQ7L8S5 288 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 FERMT3Q86UX7 667 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 MARCH9Q86YJ5 346 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 OTUD7AQ8TE49 926 aaPredicted RBP6.36□□□□□ -1.39
NCL-208ENST00000466274 ATP2A3Q93084 1043 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 SH2D3AQ9BRG2 576 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 MTA3Q9BTC8 594 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 FBRSL1Q9HCM7 1045 aaKnown RBP6.36□□□□□ -1.39
NCL-208ENST00000466274 HPS4Q9NQG7 708 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 FBXL5Q9UKA1 691 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 YIPF1Q9Y548 306 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 PCDHGB2Q9Y5G2 931 aa6.36□□□□□ -1.39
NCL-208ENST00000466274 ANKRD17O75179 2603 aaKnown RBP6.36□□□□□ -1.39
NCL-208ENST00000466274 TICRRQ7Z2Z1 1910 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 A0A1B0GUA9 196 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 A0A1W2PQJ5 194 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 hCG_1642624A0A1W2PR95 340 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 TMEM150BA6NC51 233 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 PTGESO14684 152 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 FGF10O15520 208 aaPredicted RBP6.35□□□□□ -1.39
NCL-208ENST00000466274 ZNF217O75362 1048 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 PRAMEF12O95522 483 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 AFPP02771 609 aaKnown RBP6.35□□□□□ -1.39
NCL-208ENST00000466274 DBHP09172 617 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 PFKLP17858 780 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 TACR1P25103 407 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 DDX6P26196 483 aaKnown RBP eCLIP6.35□□□□□ -1.39
NCL-208ENST00000466274 GABRR2P28476 465 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 MATKP42679 507 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 CLCNKBP51801 687 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 CCDC173Q0VFZ6 552 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 SCRN1Q12765 414 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 GRIK2Q13002 908 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 VEPH1Q14D04 833 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 TAF12Q16514 161 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 UPP1Q16831 310 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 INAVAQ3KP66 663 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 ANKRD39Q53RE8 183 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 STXBP5Q5T5C0 1151 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 ARHGAP40Q5TG30 622 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 TRIM68Q6AZZ1 485 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 PAQR3Q6TCH7 311 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 SYNE3Q6ZMZ3 975 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 ANO5Q75V66 913 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 APBB1IPQ7Z5R6 666 aaPredicted RBP6.35□□□□□ -1.39
NCL-208ENST00000466274 DNAJB7Q7Z6W7 309 aaPredicted RBP6.35□□□□□ -1.39
NCL-208ENST00000466274 TMC8Q8IU68 726 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 ADGRG2Q8IZP9 1017 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 CMTM8Q8IZV2 173 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 ZNF513Q8N8E2 541 aaPredicted RBP6.35□□□□□ -1.39
NCL-208ENST00000466274 TRIML1Q8N9V2 468 aa6.35□□□□□ -1.39
NCL-208ENST00000466274 IGDCC4Q8TDY8 1250 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms