RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 B3GAT3O94766 335 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 OAZ2O95190 189 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 FGBP02675 491 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 FTLP02792 175 aaPredicted RBP5.79□□□□□ -1.48
VPS41-211ENST00000466017 AMHP03971 560 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 TP53P04637 393 aaPredicted RBP5.79□□□□□ -1.48
VPS41-211ENST00000466017 GALTP07902 379 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 MMEP08473 750 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 KRT5P13647 590 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 PRLRP16471 622 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 ITGB8P26012 769 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 PCSK1P29120 753 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 USP8P40818 1118 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 GPD2P43304 727 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 GABRB2P47870 512 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 SOX9P48436 509 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 CLCNKBP51801 687 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 GUCY2FP51841 1108 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 NDST1P52848 882 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 GALCP54803 685 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 CDH8P55286 799 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 SNX16P57768 344 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 NOMO3P69849 1222 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 GPC5P78333 572 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 HTRA4P83105 476 aaPredicted RBP5.79□□□□□ -1.48
VPS41-211ENST00000466017 ARID5AQ03989 594 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 SMARCB1Q12824 385 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 ZNF268Q14587 947 aaPredicted RBP5.79□□□□□ -1.48
VPS41-211ENST00000466017 MAPRE1Q15691 268 aaKnown RBP5.79□□□□□ -1.48
VPS41-211ENST00000466017 CLEC16AQ2KHT3 1053 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 TCTN1Q2MV58 587 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 FAM171BQ6P995 826 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 DSTYKQ6XUX3 929 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 PRR23BQ6ZRT6 265 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 SLFN11Q7Z7L1 901 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 KRTAP1-3Q8IUG1 177 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 CMTR2Q8IYT2 770 aaKnown RBP5.79□□□□□ -1.48
VPS41-211ENST00000466017 RNF168Q8IYW5 571 aaPredicted RBP5.79□□□□□ -1.48
VPS41-211ENST00000466017 THEM5Q8N1Q8 247 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 TMEM35BQ8NCS4 154 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 ACRBPQ8NEB7 543 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 OR6B3Q8NGW1 331 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 KBTBD7Q8WVZ9 684 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 HERVK_113Q902F9 699 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 ASIC4Q96FT7 647 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 HSFY1Q96LI6 401 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 FAM193BQ96PV7 902 aaPredicted RBP5.79□□□□□ -1.48
VPS41-211ENST00000466017 FERD3LQ96RJ6 166 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 MMS19Q96T76 1030 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 HNRNPABQ99729 332 aaKnown RBP5.79□□□□□ -1.48
VPS41-211ENST00000466017 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS41-211ENST00000466017 ELOVL4Q9GZR5 314 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.79□□□□□ -1.48
VPS41-211ENST00000466017 TBC1D13Q9NVG8 400 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 GFOD1Q9NXC2 390 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 WDR35Q9P2L0 1181 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 UVRAGQ9P2Y5 699 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 LCMT1Q9UIC8 334 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 TMEM59LQ9UK28 342 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 CDH9Q9ULB4 789 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 L1RE1Q9UN81 338 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 FAN1Q9Y2M0 1017 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 CEP83Q9Y592 693 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 MICAL3Q7RTP6 2002 aa5.79□□□□□ -1.48
VPS41-211ENST00000466017 TDRD15B5MCY1 1934 aaKnown RBP5.78□□□□□ -1.48
VPS41-211ENST00000466017 TCRBV5S1A1TA0A578 114 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 USP27XA6NNY8 438 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 A8MXQ7 604 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 O00370 1275 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 THAP12O43422 761 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 KIF5CO60282 957 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 TBC1D4O60343 1298 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 POMCP01189 267 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 CYP1A2P05177 515 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 PNMA6AP0CW24 399 aaPredicted RBP5.78□□□□□ -1.48
VPS41-211ENST00000466017 FGFR1P11362 822 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 ODC1P11926 461 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 CSF2RAP15509 400 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 PTPN1P18031 435 aaKnown RBP5.78□□□□□ -1.48
VPS41-211ENST00000466017 MMP8P22894 467 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 ACADSBP45954 432 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 TAP1Q03518 808 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 MESP2Q0VG99 397 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 PTP4A2Q12974 167 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 AUHQ13825 339 aaKnown RBP5.78□□□□□ -1.48
VPS41-211ENST00000466017 SCN5AQ14524 2016 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 ZNF124Q15973 351 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 BBS9Q3SYG4 887 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 ARHGAP29Q52LW3 1261 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 TMEM240Q5SV17 173 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 PLEKHA7Q6IQ23 1121 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 PSRC1Q6PGN9 363 aaPredicted RBP5.78□□□□□ -1.48
VPS41-211ENST00000466017 LIN28BQ6ZN17 250 aaKnown RBP eCLIP5.78□□□□□ -1.48
VPS41-211ENST00000466017 C16orf59Q7L2K0 433 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 ARCQ7LC44 396 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 DEFB128Q7Z7B8 93 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 KIAA1328Q86T90 577 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 TMEM110Q86TL2 294 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 METTL23Q86XA0 190 aa5.78□□□□□ -1.48
VPS41-211ENST00000466017 ZSWIM9Q86XI8 627 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms