RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 XPO7Q9UIA9 1087 aaKnown RBP12.87□□□□□ -0.35
CHPF2-202ENST00000465601 TRIM24O15164 1050 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 RTN2O75298 545 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 TULP3O75386 442 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 LATS1O95835 1130 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 APOEP02649 317 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 KRT3P12035 628 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 RRM1P23921 792 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 HNRNPH3P31942 346 aaKnown RBP12.86□□□□□ -0.35
CHPF2-202ENST00000465601 KDSRQ06136 332 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 MESP2Q0VG99 397 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 TBX2Q13207 712 aaPredicted RBP12.86□□□□□ -0.35
CHPF2-202ENST00000465601 CCINQ13939 588 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 SLC25A52Q3SY17 297 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 DGKKQ5KSL6 1271 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 OTUD1Q5VV17 481 aaPredicted RBP12.86□□□□□ -0.35
CHPF2-202ENST00000465601 NADSYN1Q6IA69 706 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 RFWD3Q6PCD5 774 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 ETFBKMTQ8IXQ9 262 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 FAM217AQ8IXS0 508 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 DTWD2Q8NBA8 298 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 C3orf20Q8ND61 904 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 DDI1Q8WTU0 396 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 NT5C3BQ969T7 300 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 EXOC4Q96A65 974 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 AZIN2Q96A70 460 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 CFAP57Q96MR6 1250 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 XPO6Q96QU8 1125 aaKnown RBP12.86□□□□□ -0.35
CHPF2-202ENST00000465601 PNKPQ96T60 521 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 DNAJC7Q99615 494 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.86□□□□□ -0.356e-6■■■□□ 15.9
CHPF2-202ENST00000465601 RRN3Q9NYV6 651 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 ARHGAP20Q9P2F6 1191 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 STOML2Q9UJZ1 356 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 STAP1Q9ULZ2 295 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 SDK1Q7Z5N4 2213 aa12.86□□□□□ -0.35
CHPF2-202ENST00000465601 TCRBV5S1A1TA0A578 114 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 ANTXRLA6NF34 631 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 SIGLEC16A6NMB1 481 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 KCNU1A8MYU2 1149 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 MFAP3LO75121 409 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 CYBBP04839 570 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 PDGFRAP16234 1089 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 DRD1P21728 446 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 SLC6A4P31645 630 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 CCR1P32246 355 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 RFC1P35251 1148 aaPredicted RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 EIF4A3P38919 411 aaKnown RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 RPS9P46781 194 aaKnown RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 ATXN1P54253 815 aaKnown RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 GSCP56915 257 aaPredicted RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 ATP11AP98196 1134 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 DEUP1Q05D60 604 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 LRRC32Q14392 662 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 TSR1Q2NL82 804 aaKnown RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 CCDC14Q49A88 953 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 FAM133BQ5BKY9 247 aaKnown RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 FYB2Q5VWT5 728 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 PPP1R2P3Q6NXS1 205 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 DNAJC24Q6P3W2 148 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 WDR59Q6PJI9 974 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 Q6ZS52 159 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 ARCQ7LC44 396 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 VPS36Q86VN1 386 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 SFTPA1Q8IWL2 248 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 DRC7Q8IY82 874 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 ATP6V0D2Q8N8Y2 350 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 EZH1Q92800 747 aaPredicted RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 VCPIP1Q96JH7 1222 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 ARHGEF4Q9NR80 690 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 PIGVQ9NUD9 493 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 DNAJC17Q9NVM6 304 aaKnown RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 ZNHIT6Q9NWK9 470 aaKnown RBP12.85□□□□□ -0.35
CHPF2-202ENST00000465601 DEC1Q9P2X7 70 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 RAPGEFL1Q9UHV5 662 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 SLC12A6Q9UHW9 1150 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 CLEC4EQ9ULY5 219 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 KIAA1549LQ6ZVL6 1849 aa12.85□□□□□ -0.35
CHPF2-202ENST00000465601 A0A087X0T9 212 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 C2CD4BA6NLJ0 364 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.84□□□□□ -0.35
CHPF2-202ENST00000465601 AKR1B15C9JRZ8 316 aaPredicted RBP12.84□□□□□ -0.35
CHPF2-202ENST00000465601 GFRA2O00451 464 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 ATMINO43313 823 aaPredicted RBP12.84□□□□□ -0.35
CHPF2-202ENST00000465601 CACNG3O60359 315 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 KAT7O95251 611 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 ADCY5O95622 1261 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 F9P00740 461 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 PENKP01210 267 aaPredicted RBP12.84□□□□□ -0.35
CHPF2-202ENST00000465601 APODP05090 189 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 CISD3P0C7P0 127 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 FAM228BP0C875 321 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 SLC2A3P11169 496 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 ABCB4P21439 1286 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 SDC4P31431 198 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 EIF2DP41214 584 aaKnown RBP12.84□□□□□ -0.35
CHPF2-202ENST00000465601 CXCR3P49682 368 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 SGSHP51688 502 aa12.84□□□□□ -0.35
CHPF2-202ENST00000465601 RPL7AP62424 266 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms