RNA–Protein interactions for RNA: ENST00000465457.1

HDAC6-215, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 563 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-215ENST00000465457 UROC1Q96N76 676 aa14.48□□□□□ -0.09
HDAC6-215ENST00000465457 MIS12Q9H081 205 aa14.48□□□□□ -0.09
HDAC6-215ENST00000465457 ANKZF1Q9H8Y5 726 aa14.48□□□□□ -0.09
HDAC6-215ENST00000465457 ARFGAP3Q9NP61 516 aa14.48□□□□□ -0.09
HDAC6-215ENST00000465457 PARVAQ9NVD7 372 aa14.48□□□□□ -0.09
HDAC6-215ENST00000465457 AFF4Q9UHB7 1163 aaKnown RBP14.48□□□□□ -0.09
HDAC6-215ENST00000465457 INVSQ9Y283 1065 aa14.48□□□□□ -0.09
HDAC6-215ENST00000465457 ALG6Q9Y672 507 aa14.48□□□□□ -0.09
HDAC6-215ENST00000465457 CCDC163A0A0D9SF12 145 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 GOLGA6L10A0A0M3HER8 536 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 BCLAF3A2AJT9 711 aaKnown RBP14.47□□□□□ -0.09
HDAC6-215ENST00000465457 PDE2AO00408 941 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-215ENST00000465457 RNF40O75150 1001 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 CILPO75339 1184 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 EGFP01133 1207 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 VDRP11473 427 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 MMP8P22894 467 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 CTNNA2P26232 953 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 MAN1A1P33908 653 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 CDR1P51861 262 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 SOWAHCQ53LP3 525 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-215ENST00000465457 TPGS2Q68CL5 300 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 PLEKHA7Q6IQ23 1121 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 DNAAF5Q86Y56 855 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 NOA1Q8NC60 698 aaKnown RBP14.47□□□□□ -0.09
HDAC6-215ENST00000465457 ELMO3Q96BJ8 720 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 CYFIP2Q96F07 1278 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 TMEM176AQ96HP8 235 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 PSMB7Q99436 277 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 ZSWIM1Q9BR11 485 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 FBRSL1Q9HCM7 1045 aaKnown RBP14.47□□□□□ -0.09
HDAC6-215ENST00000465457 SLC38A7Q9NVC3 462 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 SLC8A2Q9UPR5 921 aa14.47□□□□□ -0.09
HDAC6-215ENST00000465457 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.47□□□□□ -0.09
HDAC6-215ENST00000465457 APC2O95996 2303 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 MYH10P35580 1976 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 MYO1FO00160 1098 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 SYN3O14994 580 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 DDX3YO15523 660 aaKnown RBP14.46□□□□□ -0.09
HDAC6-215ENST00000465457 SPOPO43791 374 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 CEP104O60308 925 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 FAM163BP0C2L3 166 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 CTNNA1P35221 906 aaKnown RBP14.46□□□□□ -0.09
HDAC6-215ENST00000465457 GSCP56915 257 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-215ENST00000465457 CYP4F8P98187 520 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 C2orf54Q08AI8 447 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 MESDQ14696 234 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 TRIM68Q6AZZ1 485 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 ZNF280DQ6N043 979 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 C8orf74Q6P047 294 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 C19orf48Q6RUI8 117 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 UNC93AQ86WB7 457 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 SYNPOQ8N3V7 929 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 LEMD2Q8NC56 503 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 RIN3Q8TB24 985 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 CPA5Q8WXQ8 436 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 EZH1Q92800 747 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-215ENST00000465457 E2F7Q96AV8 911 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 TMEM209Q96SK2 561 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 HPS4Q9NQG7 708 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 WDR35Q9P2L0 1181 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 ANAPC7Q9UJX3 599 aa14.46□□□□□ -0.09
HDAC6-215ENST00000465457 PACSIN2Q9UNF0 486 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-215ENST00000465457 ACACAQ13085 2346 aa14.46□□□□□ -0.1
HDAC6-215ENST00000465457 SPAARA0A1B0GVQ0 90 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 ANTXRLA6NF34 631 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 RHOXF2BP0C7M4 288 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 CEACAM1P13688 526 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 CD19P15391 556 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 CSRP1P21291 193 aaKnown RBP14.45□□□□□ -0.1
HDAC6-215ENST00000465457 BCKDHBP21953 392 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 COMTP21964 271 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 RRM1P23921 792 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 CLCN6P51797 869 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 RAD23BP54727 409 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 SNX16P57768 344 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 PTP4A2Q12974 167 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 UAP1L1Q3KQV9 507 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 SV2CQ496J9 727 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 TMEM196Q5HYL7 178 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 GPR158Q5T848 1215 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 SEL1L2Q5TEA6 688 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 DAB2IPQ5VWQ8 1189 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 SUSD3Q96L08 255 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 RHOXF2Q9BQY4 288 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 C11orf70Q9BRQ4 267 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 NT5C1AQ9BXI3 368 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 SMYD3Q9H7B4 428 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 TMEM9BQ9NQ34 198 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 TMEM59LQ9UK28 342 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 SLC27A5Q9Y2P5 690 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 TIMM13Q9Y5L4 95 aaPredicted RBP14.45□□□□□ -0.1
HDAC6-215ENST00000465457 PLXNB3Q9ULL4 1909 aa14.45□□□□□ -0.1
HDAC6-215ENST00000465457 H7C4K7 107 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 ATMINO43313 823 aaPredicted RBP14.44□□□□□ -0.1
HDAC6-215ENST00000465457 RRP9O43818 475 aaKnown RBP14.44□□□□□ -0.1
HDAC6-215ENST00000465457 PROSCO94903 275 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 SETSIPP0DME0 302 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 PAX3P23760 479 aa14.44□□□□□ -0.1
HDAC6-215ENST00000465457 BRD2P25440 801 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms