RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 URB1O60287 2271 aaKnown RBP15.3■□□□□ 0.04
MCF2L-220ENST00000464800 HLA-EP13747 358 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 CD58P19256 250 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 GRIA4P48058 902 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 CCT8P50990 548 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 CAMK2GQ13555 558 aaPredicted RBP15.3■□□□□ 0.04
MCF2L-220ENST00000464800 CEP135Q66GS9 1140 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 TMEM215Q68D42 235 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 MARCH9Q86YJ5 346 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 KIAA0895Q8NCT3 520 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 IGSF8Q969P0 613 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 NIF3L1Q9GZT8 377 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 OSGEPQ9NPF4 335 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 FAM13BQ9NYF5 915 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 MARCH2Q9P0N8 246 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 ANKRD6Q9Y2G4 727 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 FRMD4BQ9Y2L6 1034 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 CABIN1Q9Y6J0 2220 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 SLCO1B1Q9Y6L6 691 aa15.3■□□□□ 0.04
MCF2L-220ENST00000464800 PLXNA2O75051 1894 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 COL5A1P20908 1838 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-220ENST00000464800 FAM149AA5PLN7 773 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 PDXKO00764 312 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 SEMA4FO95754 770 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 ACSL1P33121 698 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 STK4Q13043 487 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 INAVAQ3KP66 663 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 FNDC3BQ53EP0 1204 aaKnown RBP15.29■□□□□ 0.04
MCF2L-220ENST00000464800 CCDC157Q569K6 752 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 C1orf220Q5T0J3 134 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 PPP1R26Q5T8A7 1209 aaPredicted RBP15.29■□□□□ 0.04
MCF2L-220ENST00000464800 SCUBE3Q8IX30 993 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 FAM217AQ8IXS0 508 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 GRAMD1CQ8IYS0 662 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 CEP57L1Q8IYX8 460 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 PDCD7Q8N8D1 485 aaKnown RBP15.29■□□□□ 0.04
MCF2L-220ENST00000464800 PLD4Q96BZ4 506 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 KCTD10Q9H3F6 313 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 FBRSQ9HAH7 460 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 APOBEC3GQ9HC16 384 aaKnown RBP15.29■□□□□ 0.04
MCF2L-220ENST00000464800 TM9SF3Q9HD45 589 aa15.29■□□□□ 0.04
MCF2L-220ENST00000464800 CELSR3Q9NYQ7 3312 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 A0A087WV48 116 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 SLC12A8A0AV02 714 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-220ENST00000464800 PCDHGA12O60330 932 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 HOXD9P28356 352 aaPredicted RBP15.28■□□□□ 0.04
MCF2L-220ENST00000464800 VAMP7P51809 220 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 YWHAGP61981 247 aaKnown RBP eCLIP15.28■□□□□ 0.04
MCF2L-220ENST00000464800 CAMK2BQ13554 666 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 SMAD1Q15797 465 aaKnown RBP15.28■□□□□ 0.04
MCF2L-220ENST00000464800 PTPRNQ16849 979 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 MPPE1Q53F39 396 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 LAYNQ6UX15 382 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 ADAT2Q7Z6V5 191 aaKnown RBP15.28■□□□□ 0.04
MCF2L-220ENST00000464800 CCDC150Q8NCX0 1101 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 TAS1R2Q8TE23 839 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 WFIKKN2Q8TEU8 576 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 BIRC7Q96CA5 298 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 BTBD1Q9H0C5 482 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 TMEM245Q9H330 911 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 FTSJ1Q9UET6 329 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 PLA2G4CQ9UP65 541 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 KNL1Q8NG31 2342 aa15.28■□□□□ 0.04
MCF2L-220ENST00000464800 KLRC4O43908 158 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 FSBPO95073 299 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 CD27P26842 260 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 ME1P48163 572 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 GCLMP48507 274 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 HARS2P49590 506 aaKnown RBP15.27■□□□□ 0.04
MCF2L-220ENST00000464800 ZBTB16Q05516 673 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 PDE4CQ08493 712 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 TTC31Q49AM3 519 aaPredicted RBP15.27■□□□□ 0.04
MCF2L-220ENST00000464800 ZNF394Q53GI3 561 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 RESP18Q5W5W9 173 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 CHST9Q7L1S5 443 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 ZNF366Q8N895 744 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 CYB5D2Q8WUJ1 264 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 HEXIM2Q96MH2 286 aaKnown RBP15.27■□□□□ 0.04
MCF2L-220ENST00000464800 ARID3AQ99856 593 aa15.27■□□□□ 0.04
MCF2L-220ENST00000464800 NYNRINQ9P2P1 1898 aaKnown RBP15.27■□□□□ 0.03
MCF2L-220ENST00000464800 E9PAM4 449 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 H0Y8X5 98 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 KCNK3O14649 394 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 MAPK13O15264 365 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 CALUO43852 315 aaPredicted RBP15.26■□□□□ 0.03
MCF2L-220ENST00000464800 TSPAN3O60637 253 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 DNTTP04053 509 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 TRIM49P0CI25 452 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 TRIM49CP0CI26 452 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 C7P10643 843 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 HLA-FP30511 346 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 ABCG1P45844 678 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 BCAT1P54687 386 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 SLC8A3P57103 927 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 ZNF445P59923 1031 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 RPS14P62263 151 aaKnown RBP15.26■□□□□ 0.03
MCF2L-220ENST00000464800 IL9RQ01113 521 aa15.26■□□□□ 0.03
MCF2L-220ENST00000464800 TRIP4Q15650 581 aaPredicted RBP15.26■□□□□ 0.03
MCF2L-220ENST00000464800 KMT5BQ4FZB7 885 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms