RNA–Protein interactions for RNA: ENST00000463632.1

RPA3-206, Transcript of replication protein A3, humanhuman

TSL 5

Gene RPA3, Length 793 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-206ENST00000463632 SLC14A1Q13336 389 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 CUL2Q13617 745 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 EIF4HQ15056 248 aaKnown RBP12.87□□□□□ -0.35
RPA3-206ENST00000463632 BSPRYQ5W0U4 402 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 CHST9Q7L1S5 443 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 ZNF276Q8N554 614 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 ZNF366Q8N895 744 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 PNPLA1Q8N8W4 532 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 GOLGA1Q92805 767 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 GATA6Q92908 595 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 P2RY11Q96G91 374 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 FAXDC2Q96IV6 333 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 SLC2A11Q9BYW1 496 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 GAREM1Q9H706 876 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 CD248Q9HCU0 757 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 ABCB8Q9NUT2 735 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 STIM2Q9P246 746 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 USP36Q9P275 1121 aaKnown RBP12.87□□□□□ -0.35
RPA3-206ENST00000463632 EIF2B4Q9UI10 523 aaKnown RBP12.87□□□□□ -0.35
RPA3-206ENST00000463632 MSRB2Q9Y3D2 182 aa12.87□□□□□ -0.35
RPA3-206ENST00000463632 SRRM3A6NNA2 597 aaPredicted RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 KCNJ18B7U540 433 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 MSI1O43347 362 aaKnown RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 SMC2O95347 1197 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 CER1O95813 267 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 VDRP11473 427 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 MATKP42679 507 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 PRCPP42785 496 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 FKBP3Q00688 224 aaKnown RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 CCDC40Q4G0X9 1142 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 CBWD6Q4V339 395 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 ZCWPW2Q504Y3 356 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 CCDC157Q569K6 752 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 RAB41Q5JT25 222 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 CBWD3Q5JTY5 395 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 CBWD5Q5RIA9 395 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 ADAT2Q7Z6V5 191 aaKnown RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 METTL3Q86U44 580 aaKnown RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 CCDC117Q8IWD4 279 aaPredicted RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 CPXM2Q8N436 756 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 CADM4Q8NFZ8 388 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 OR2T3Q8NH03 318 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 SMARCE1Q969G3 411 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 PIWIL1Q96J94 861 aaKnown RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 LHX5Q9H2C1 402 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 ARMCX3Q9UH62 379 aaPredicted RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 APOBEC2Q9Y235 224 aaKnown RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 ZDHHC9Q9Y397 364 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 HBS1LQ9Y450 684 aaKnown RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 PCDHB4Q9Y5E5 795 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 EML5Q05BV3 1969 aa12.86□□□□□ -0.35
RPA3-206ENST00000463632 HELZP42694 1942 aaKnown RBP12.86□□□□□ -0.35
RPA3-206ENST00000463632 FAM237AA0A1B0GTK4 181 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 A0A1B0GVT2 93 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 FAM47DPA6NHR8 397 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 METTL12A8MUP2 240 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 TBL1XO60907 577 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 FSBPO95073 299 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 DNTTP04053 509 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 ATP5BP06576 529 aaKnown RBP12.85□□□□□ -0.35
RPA3-206ENST00000463632 FTH1P19P0C7X4 201 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 SETSIPP0DME0 302 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 PABPC1P11940 636 aaKnown RBP12.85□□□□□ -0.35
RPA3-206ENST00000463632 POLR2EP19388 210 aaKnown RBP12.85□□□□□ -0.35
RPA3-206ENST00000463632 TBXAS1P24557 533 aaPredicted RBP12.85□□□□□ -0.35
RPA3-206ENST00000463632 SLC11A2P49281 568 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 STIM1Q13586 685 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 TEAD4Q15561 434 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 TRIP4Q15650 581 aaPredicted RBP12.85□□□□□ -0.35
RPA3-206ENST00000463632 ANKRD40Q6AI12 368 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 PM20D1Q6GTS8 502 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 ISM2Q6H9L7 571 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 RFWD3Q6PCD5 774 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 TMEM270Q6UE05 265 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 IL27RAQ6UWB1 636 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 WFIKKN2Q8TEU8 576 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 ERCC4Q92889 916 aaPredicted RBP12.85□□□□□ -0.35
RPA3-206ENST00000463632 MIS12Q9H081 205 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 IL21RQ9HBE5 538 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 ABCC13Q9NSE7 274 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 HOOK1Q9UJC3 728 aaKnown RBP12.85□□□□□ -0.35
RPA3-206ENST00000463632 GGA2Q9UJY4 613 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 PTPRDP23468 1912 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 GON4LQ3T8J9 2241 aa12.85□□□□□ -0.35
RPA3-206ENST00000463632 GOLGA6L7A0A1B0GV03 622 aa12.84□□□□□ -0.35
RPA3-206ENST00000463632 TYW5A2RUC4 315 aaKnown RBP12.84□□□□□ -0.35
RPA3-206ENST00000463632 YJEFN3A6XGL0 299 aa12.84□□□□□ -0.35
RPA3-206ENST00000463632 E7ENQ6 273 aa12.84□□□□□ -0.35
RPA3-206ENST00000463632 M0QYV0 167 aa12.84□□□□□ -0.35
RPA3-206ENST00000463632 SLC16A3O15427 465 aaKnown RBP12.84□□□□□ -0.35
RPA3-206ENST00000463632 HOXD9P28356 352 aaPredicted RBP12.84□□□□□ -0.35
RPA3-206ENST00000463632 CSNK1EP49674 416 aaKnown RBP12.84□□□□□ -0.35
RPA3-206ENST00000463632 ZNF445P59923 1031 aa12.84□□□□□ -0.35
RPA3-206ENST00000463632 ST8SIA6P61647 398 aa12.84□□□□□ -0.35
RPA3-206ENST00000463632 CETN1Q12798 172 aa12.84□□□□□ -0.35
RPA3-206ENST00000463632 HLA-BQ31612 363 aa12.84□□□□□ -0.35
RPA3-206ENST00000463632 TTC31Q49AM3 519 aaPredicted RBP12.84□□□□□ -0.35
RPA3-206ENST00000463632 ADGRF1Q5T601 910 aa12.84□□□□□ -0.35
RPA3-206ENST00000463632 ZNF658Q5TYW1 1059 aaPredicted RBP12.84□□□□□ -0.35
RPA3-206ENST00000463632 TMEM215Q68D42 235 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms