RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 WASH3PC4AMC7 463 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 ACACBO00763 2458 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 CDX4O14627 284 aaPredicted RBP21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 SART1O43290 800 aaKnown RBP21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 IRX4P78413 519 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 STARD3Q14849 445 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 GON4LQ3T8J9 2241 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 NUGGCQ68CJ6 796 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 SLC23A3Q6PIS1 610 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 KIAA0907Q7Z7F0 614 aaPredicted RBP21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 UNC45BQ8IWX7 931 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 TMEM9BQ9NQ34 198 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 TMEM74BQ9NUR3 256 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 RAD54BQ9Y620 910 aa21.42■■□□□ 1.02
PDLIM4-205ENST00000463615 C4orf47A7E2U8 309 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 FYNP06241 537 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 IL12RB1P42701 662 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 ACADSBP45954 432 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 RPL6Q02878 288 aaKnown RBP21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 LMAN2Q12907 356 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 NNTQ13423 1086 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 DAB2IPQ5VWQ8 1189 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 TMEM215Q68D42 235 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 RABEPKQ7Z6M1 372 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 CEP76Q8TAP6 659 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 WFIKKN2Q8TEU8 576 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 TMA16Q96EY4 203 aaKnown RBP21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 SLC4A5Q9BY07 1137 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 CHMP5Q9NZZ3 219 aa21.41■■□□□ 1.02
PDLIM4-205ENST00000463615 GTPBP10A4D1E9 387 aaKnown RBP21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 IRAK2O43187 625 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 MSI1O43347 362 aaKnown RBP21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 KCNK5O95279 499 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 ZNF33AQ06730 810 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 ZNF234Q14588 700 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 FUT11Q495W5 492 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 TRIM61Q5EBN2 209 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 TRIM65Q6PJ69 517 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 IRF2BP1Q8IU81 584 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 MLKLQ8NB16 471 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 CLEC4CQ8WTT0 213 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 GOLGA1Q92805 767 aa21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 ZNF419Q96HQ0 510 aaPredicted RBP21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 UBE2TQ9NPD8 197 aaPredicted RBP21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 USP36Q9P275 1121 aaKnown RBP21.4■■□□□ 1.02
PDLIM4-205ENST00000463615 CKAP5Q14008 2032 aa21.39■■□□□ 1.02
PDLIM4-205ENST00000463615 MED7O43513 233 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 CALCAP01258 141 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 IGLV3-19P01714 112 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 NCAM1P13591 858 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 ITPKAP23677 461 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 HLA-FP30511 346 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 FAM133BQ5BKY9 247 aaKnown RBP21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 PIK3R6Q5UE93 754 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 ARMCX6Q7L4S7 300 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 TMEM110Q86TL2 294 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 ZNF557Q8N988 423 aaPredicted RBP21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 ZNF606Q8WXB4 792 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 TRIM62Q9BVG3 475 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 NUSAP1Q9BXS6 441 aaKnown RBP21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 MKRN2Q9H000 416 aaKnown RBP21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 ITM2CQ9NQX7 267 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 CYP8B1Q9UNU6 501 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 LAMA1P25391 3075 aa21.39■■□□□ 1.01
PDLIM4-205ENST00000463615 PI4KAP42356 2102 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 ACSL4O60488 711 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 CSRP1P21291 193 aaKnown RBP21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 PMLP29590 882 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 SLC11A2P49281 568 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 TBX4P57082 545 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 CAMK4Q16566 473 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 DUOXA1Q1HG43 343 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 SLC41A1Q8IVJ1 513 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 SCUBE3Q8IX30 993 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 DQX1Q8TE96 717 aaKnown RBP21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 SLC39A13Q96H72 371 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 SERPINB11Q96P15 392 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 PRDM16Q9HAZ2 1276 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 CAPN10Q9HC96 672 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 SLC6A14Q9UN76 642 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 TLR6Q9Y2C9 796 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 NFE2L3Q9Y4A8 694 aa21.38■■□□□ 1.01
PDLIM4-205ENST00000463615 CEP192Q8TEP8 1941 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 PIK3R2O00459 728 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 TSPAN3O60637 253 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 SERPINF2P08697 491 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 KRT5P13647 590 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 COPAP53621 1224 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 N4BP2L1Q5TBK1 243 aaPredicted RBP21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 DENND1BQ6P3S1 775 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 GBP6Q6ZN66 633 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 ADIPOR2Q86V24 386 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 SHC3Q92529 594 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 FOXJ1Q92949 421 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 FCRL2Q96LA5 508 aaPredicted RBP21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 CIPCQ9C0C6 399 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 MIS12Q9H081 205 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 SLC6A17Q9H1V8 727 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 TMEM245Q9H330 911 aa21.37■■□□□ 1.01
PDLIM4-205ENST00000463615 APEX2Q9UBZ4 518 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms