RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 FARP1Q9Y4F1 1045 aaPredicted RBP10.29□□□□□ -0.76
PTPRD-207ENST00000463477 BDP1A6H8Y1 2624 aa10.29□□□□□ -0.76
PTPRD-207ENST00000463477 GOLGA6L7A0A1B0GV03 622 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 TMEM120BA0PK00 339 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 ANKRD65E5RJM6 399 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 I3L4J1 428 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 APOC4-APOC2K7ER74 178 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 TGM5O43548 720 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 TBC1D4O60343 1298 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 MICAL2O94851 1124 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 PAPLNO95428 1278 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 GLUD1P00367 558 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 APOC2P02655 101 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 ERBB2P04626 1255 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 KRT19P08727 400 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 SETSIPP0DME0 302 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 IL9P15248 144 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 TKTP29401 623 aaKnown RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 VPS41P49754 854 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 LIG3P49916 1009 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 ZNF143P52747 638 aaPredicted RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 RAB33AQ14088 237 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 ZFYVE27Q5T4F4 411 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 KAZNQ674X7 775 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 TXNRD3NBQ6F5E7 133 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 LCLAT1Q6UWP7 414 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 TMEM130Q8N3G9 435 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 APPL2Q8NEU8 664 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 JOSD2Q8TAC2 188 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 CKAP2Q8WWK9 683 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 CCT6BQ92526 530 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 MAML1Q92585 1016 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 HPDLQ96IR7 371 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 UHRF1Q96T88 793 aaPredicted RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 PLCD4Q9BRC7 762 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 KLHL11Q9NVR0 708 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 SLC24A2Q9UI40 661 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 ZNF487B1APH4 448 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 E7ESA3 106 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 H7C4K7 107 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 DLL1O00548 723 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 RNF8O76064 485 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 OAZ2O95190 189 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 OAS1P00973 400 aaKnown RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 GSTA1P08263 222 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 PECAM1P16284 738 aaPredicted RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 RPL17P18621 184 aaKnown RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 OR1D2P34982 312 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 RAP1GAPP47736 663 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 MYO1EQ12965 1108 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 GPS1Q13098 491 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 ZC3H12AQ5D1E8 599 aaKnown RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 VARS2Q5ST30 1063 aaKnown RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 SLC8B1Q6J4K2 584 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 CES5AQ6NT32 575 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 ELMSAN1Q6PJG2 1045 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 PPP1R21Q6ZMI0 780 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 ARHGEF18Q6ZSZ5 1173 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 CENPUQ71F23 418 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 RTL10Q7L3V2 364 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 PPIL6Q8IXY8 311 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 LRRC34Q8IZ02 419 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 ACTL9Q8TC94 416 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 PRCCQ92733 491 aaPredicted RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 SGSM3Q96HU1 749 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 TWNKQ96RR1 684 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 PRMT1Q99873 361 aaKnown RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 CNPY3Q9BT09 278 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 OXCT2Q9BYC2 517 aaPredicted RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 RHOBTB2Q9BYZ6 727 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 METTL5Q9NRN9 209 aaKnown RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 SAMD15Q9P1V8 674 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 PCDHB8Q9UN66 801 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 NAALADL1Q9UQQ1 740 aa10.28□□□□□ -0.76
PTPRD-207ENST00000463477 USP15Q9Y4E8 981 aaPredicted RBP10.28□□□□□ -0.76
PTPRD-207ENST00000463477 TCF20Q9UGU0 1960 aaKnown RBP10.27□□□□□ -0.77
PTPRD-207ENST00000463477 CCT8L1PA6NM43 557 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 GOLGA8SH3BPF8 625 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 DPYSL4O14531 572 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 PPEF2O14830 753 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 PRPF4O43172 522 aaKnown RBP eCLIP10.27□□□□□ -0.77
PTPRD-207ENST00000463477 ADAM12O43184 909 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 TRUB2O95900 331 aaKnown RBP10.27□□□□□ -0.77
PTPRD-207ENST00000463477 BRAFP15056 766 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 TYMPP19971 482 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 IL1R2P27930 398 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 PNPLA4P41247 253 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 TAF6P49848 677 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 CDH8P55286 799 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 SNX16P57768 344 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 OTUD4Q01804 1114 aaKnown RBP10.27□□□□□ -0.77
PTPRD-207ENST00000463477 ANKRD20A8PQ5CZ79 823 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 ATAT1Q5SQI0 421 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 RSPO2Q6UXX9 243 aaPredicted RBP10.27□□□□□ -0.77
PTPRD-207ENST00000463477 GPR149Q86SP6 731 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 PACS2Q86VP3 889 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 ADHFE1Q8IWW8 467 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 GLIS1Q8NBF1 620 aa10.27□□□□□ -0.77
PTPRD-207ENST00000463477 KREMEN2Q8NCW0 462 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms