RNA–Protein interactions for RNA: ENST00000463172.5

HDAC1-203, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-203ENST00000463172 TRIM24O15164 1050 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 MSI1O43347 362 aaKnown RBP13.63□□□□□ -0.23
HDAC1-203ENST00000463172 ACSL4O60488 711 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 SYNCRIPO60506 623 aaKnown RBP13.63□□□□□ -0.23
HDAC1-203ENST00000463172 ADAM23O75077 832 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 CALCAP01258 141 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 SLC2A3P11169 496 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 CDK17Q00537 523 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 MIIPQ5JXC2 388 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 EGFLAMQ63HQ2 1017 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 SLC36A4Q6YBV0 504 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 PRR23CQ6ZRP0 262 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 RBM43Q6ZSC3 357 aaKnown RBP13.63□□□□□ -0.23
HDAC1-203ENST00000463172 TOGARAM2Q6ZUX3 1019 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 LPCAT2Q7L5N7 544 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 ZDHHC17Q8IUH5 632 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 SFTPA1Q8IWL2 248 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 GPT2Q8TD30 523 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 NETO1Q8TDF5 533 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 DQX1Q8TE96 717 aaKnown RBP13.63□□□□□ -0.23
HDAC1-203ENST00000463172 CLEC4CQ8WTT0 213 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 LSM14BQ9BX40 385 aaKnown RBP13.63□□□□□ -0.23
HDAC1-203ENST00000463172 CIPCQ9C0C6 399 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 DUSP15Q9H1R2 295 aaPredicted RBP13.63□□□□□ -0.23
HDAC1-203ENST00000463172 ARRDC1-AS1Q9H2J1 176 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 TMEM51Q9NW97 253 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 ASNSD1Q9NWL6 643 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 PLA2G4CQ9UP65 541 aa13.63□□□□□ -0.23
HDAC1-203ENST00000463172 PLXND1Q9Y4D7 1925 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 DMXL1Q9Y485 3027 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 FOXN3O00409 490 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-203ENST00000463172 TSPAN3O60637 253 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 HSF2BPO75031 334 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 IGLV3-27P01718 113 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 ZNF806P0C7X5 589 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 CDK11BP21127 795 aaKnown RBP13.62□□□□□ -0.23
HDAC1-203ENST00000463172 P2RY2P41231 377 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 WASP42768 502 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 MYL5Q02045 173 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 CREB5Q02930 508 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 DRAP1Q14919 205 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-203ENST00000463172 RSPO4Q2I0M5 234 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-203ENST00000463172 AASDHQ4L235 1098 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-203ENST00000463172 SPDYCQ5MJ68 293 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 KLHDC7AQ5VTJ3 777 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 C11orf57Q6ZUT1 292 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-203ENST00000463172 DGLUCYQ7Z3D6 616 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 FAM71AQ8IYT1 594 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 ABCA7Q8IZY2 2146 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 AHI1Q8N157 1196 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 ATP6V0D2Q8N8Y2 350 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 HJURPQ8NCD3 748 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-203ENST00000463172 TMEM35BQ8NCS4 154 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 OLIG1Q8TAK6 271 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 GABRG3Q99928 467 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 RTKNQ9BST9 563 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 FAM204AQ9H8W3 233 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 PARD6AQ9NPB6 346 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 SIX2Q9NPC8 291 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 ZDHHC4Q9NPG8 344 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 ELOVL2Q9NXB9 296 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 TAB2Q9NYJ8 693 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 THAP10Q9P2Z0 257 aaPredicted RBP13.62□□□□□ -0.23
HDAC1-203ENST00000463172 TJP2Q9UDY2 1190 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 NAALADL1Q9UQQ1 740 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 NUP205Q92621 2012 aa13.62□□□□□ -0.23
HDAC1-203ENST00000463172 PAPSS1O43252 624 aaPredicted RBP13.61□□□□□ -0.23
HDAC1-203ENST00000463172 AP5Z1O43299 807 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 GABBR2O75899 941 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 ATP5BP06576 529 aaKnown RBP13.61□□□□□ -0.23
HDAC1-203ENST00000463172 UCHL3P15374 230 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 ABCB4P21439 1286 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 HOXD9P28356 352 aaPredicted RBP13.61□□□□□ -0.23
HDAC1-203ENST00000463172 HOXC13P31276 330 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 MPLP40238 635 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 APBA1Q02410 837 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 PMS2CLQ68D20 193 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 OR6B2Q6IFH4 312 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 CYP2U1Q7Z449 544 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 SLC47A2Q86VL8 602 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 PASD1Q8IV76 773 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 C1orf131Q8NDD1 294 aaKnown RBP13.61□□□□□ -0.23
HDAC1-203ENST00000463172 RNF34Q969K3 372 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 RMDN1Q96DB5 314 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 PIWIL1Q96J94 861 aaKnown RBP13.61□□□□□ -0.23
HDAC1-203ENST00000463172 PCMTD1Q96MG8 357 aaPredicted RBP13.61□□□□□ -0.23
HDAC1-203ENST00000463172 STK33Q9BYT3 514 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 VPS16Q9H269 839 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 ACP6Q9NPH0 428 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 PLCB1Q9NQ66 1216 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.61□□□□□ -0.23
HDAC1-203ENST00000463172 CACNA2D2Q9NY47 1150 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 RRN3Q9NYV6 651 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 STON1Q9Y6Q2 735 aa13.61□□□□□ -0.23
HDAC1-203ENST00000463172 DCLK1O15075 740 aa13.6□□□□□ -0.23
HDAC1-203ENST00000463172 TBL1XO60907 577 aa13.6□□□□□ -0.23
HDAC1-203ENST00000463172 MOCS3O95396 460 aa13.6□□□□□ -0.23
HDAC1-203ENST00000463172 TRUB2O95900 331 aaKnown RBP13.6□□□□□ -0.23
HDAC1-203ENST00000463172 MOCS2O96007 188 aaPredicted RBP13.6□□□□□ -0.23
HDAC1-203ENST00000463172 CHRM1P11229 460 aaPredicted RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms