RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	PKN3	Q6P5Z2	889 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	NUDT18	Q6ZVK8	323 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	SND1	Q7KZF4	910 aa	Known RBP eCLIP	9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	SLC26A9	Q7LBE3	791 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	CHSY1	Q86X52	802 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	ZDHHC17	Q8IUH5	632 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	SPEM1	Q8N4L4	309 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	ATP6V0D2	Q8N8Y2	350 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	EZH1	Q92800	747 aa	Predicted RBP	9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	ERLEC1	Q96DZ1	483 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	TMA16	Q96EY4	203 aa	Known RBP	9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	SLC2A13	Q96QE2	648 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	DDX50	Q9BQ39	737 aa	Known RBP	9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	NUP58	Q9BVL2	599 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	POLR3B	Q9NW08	1133 aa	Predicted RBP	9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	SLC12A6	Q9UHW9	1150 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	MYO6	Q9UM54	1294 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	SLC8A2	Q9UPR5	921 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970		R4GN57	208 aa		9.99	□□□□□ -0.81
PSMD4-208	ENST00000462970	TYW5	A2RUC4	315 aa	Known RBP	9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	ANTXRL	A6NF34	631 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970		K7EQS6	105 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	CACNG3	O60359	315 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	TBL1X	O60907	577 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	ATG13	O75143	517 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	KLF8	O95600	359 aa	Predicted RBP	9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	IGLV3-27	P01718	113 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	CALB1	P05937	261 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	SP9	P0CG40	484 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	ABCB4	P21439	1286 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	MMP8	P22894	467 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	SLC6A4	P31645	630 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	NOS2	P35228	1153 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	EIF2D	P41214	584 aa	Known RBP	9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	MATK	P42679	507 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	WAS	P42768	502 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	GABRB2	P47870	512 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	ZNF445	P59923	1031 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	ATP11A	P98196	1134 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	DEUP1	Q05D60	604 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	GAS6	Q14393	721 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	CDO1	Q16878	200 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	FBXO43	Q4G163	708 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	E4F1	Q66K89	784 aa	Predicted RBP	9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	RAP1GAP2	Q684P5	730 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	BEND5	Q7L4P6	421 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	IRF2BP2	Q7Z5L9	587 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	CCDC117	Q8IWD4	279 aa	Predicted RBP	9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	ETFBKMT	Q8IXQ9	262 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	LGI2	Q8N0V4	545 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	SYNPO	Q8N3V7	929 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	ALLC	Q8N6M5	410 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	EMC1	Q8N766	993 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	CCDC26	Q8TAB7	109 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	ACD	Q96AP0	544 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	TBCB	Q99426	244 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	IER2	Q9BTL4	223 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	SELENOO	Q9BVL4	669 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	EDEM3	Q9BZQ6	932 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	IRF2BPL	Q9H1B7	796 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	HAUS4	Q9H6D7	363 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	C2orf42	Q9NWW7	574 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	MARK1	Q9P0L2	795 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	XPO7	Q9UIA9	1087 aa	Known RBP	9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	STAP1	Q9ULZ2	295 aa		9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	LUC7L2	Q9Y383	392 aa	Known RBP	9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	9.98	□□□□□ -0.81
PSMD4-208	ENST00000462970	ANKRD62	A6NC57	917 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	CHURC1-FNTB	B4DL54	471 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	LATS1	O95835	1130 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	PENK	P01210	267 aa	Predicted RBP	9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	TPM1	P09493	284 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	SLC2A3	P11169	496 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	UNG	P13051	313 aa	Predicted RBP	9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	TFE3	P19532	575 aa	Predicted RBP	9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	TACR2	P21452	398 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	HOXC13	P31276	330 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	CCR1	P32246	355 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	FLT3	P36888	993 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	GGCX	P38435	758 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	PBX1	P40424	430 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	TNFRSF4	P43489	277 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	PXN	P49023	591 aa	Predicted RBP	9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	FNTB	P49356	437 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	SGSH	P51688	502 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	ZBED6	P86452	979 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	CENPC	Q03188	943 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	NNT	Q13423	1086 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	DMC1	Q14565	340 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	FYB2	Q5VWT5	728 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	NADSYN1	Q6IA69	706 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	ACAD10	Q6JQN1	1059 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	DNAJC24	Q6P3W2	148 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	ZNF571	Q7Z3V5	609 aa	Predicted RBP	9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	DNAAF5	Q86Y56	855 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	MAML2	Q8IZL2	1156 aa	Predicted RBP	9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	CFAP52	Q8N1V2	620 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	CPXM2	Q8N436	756 aa		9.97	□□□□□ -0.81
PSMD4-208	ENST00000462970	CARNMT1	Q8N4J0	409 aa		9.97	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms