RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	ZNF394	Q53GI3	561 aa		11.69	□□□□□ -0.54
PTPN7-204	ENST00000462815	DENND1C	Q8IV53	801 aa		11.69	□□□□□ -0.54
PTPN7-204	ENST00000462815	DDX51	Q8N8A6	666 aa	Known RBP eCLIP	11.69	□□□□□ -0.54
PTPN7-204	ENST00000462815	SIPA1	Q96FS4	1042 aa		11.69	□□□□□ -0.54
PTPN7-204	ENST00000462815	SLC2A11	Q9BYW1	496 aa		11.69	□□□□□ -0.54
PTPN7-204	ENST00000462815	DCLK3	Q9C098	648 aa		11.69	□□□□□ -0.54
PTPN7-204	ENST00000462815	CISH	Q9NSE2	258 aa		11.69	□□□□□ -0.54
PTPN7-204	ENST00000462815	MARCH2	Q9P0N8	246 aa		11.69	□□□□□ -0.54
PTPN7-204	ENST00000462815	KIAA1522	Q9P206	1035 aa	Predicted RBP	11.69	□□□□□ -0.54
PTPN7-204	ENST00000462815	FRMD4B	Q9Y2L6	1034 aa		11.69	□□□□□ -0.54
PTPN7-204	ENST00000462815	MEI4	A8MW99	385 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	BCAT2	O15382	392 aa	Predicted RBP	11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	ZBTB24	O43167	697 aa	Predicted RBP	11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	RALA	P11233	206 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	OXTR	P30559	389 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	RDX	P35241	583 aa	Known RBP	11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	SGSH	P51688	502 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	YWHAG	P61981	247 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	HLA-B	Q31612	363 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	ADIPOR2	Q86V24	386 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	FAM186B	Q8IYM0	893 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	GUF1	Q8N442	669 aa	Known RBP	11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	UBR7	Q8N806	425 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	NDRG1	Q92597	394 aa	Known RBP	11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	PRCC	Q92733	491 aa	Predicted RBP	11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	PLD4	Q96BZ4	506 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	TMEM176A	Q96HP8	235 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	LMLN	Q96KR4	655 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	IMPG2	Q9BZV3	1241 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	PCED1A	Q9H1Q7	454 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	C6orf106	Q9H6K1	298 aa	Predicted RBP	11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	GAREM1	Q9H706	876 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	TM7SF3	Q9NS93	570 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	USP25	Q9UHP3	1055 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	EIF2B4	Q9UI10	523 aa	Known RBP	11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	BTBD3	Q9Y2F9	522 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	PCDHGB2	Q9Y5G2	931 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815	TMEM131	Q92545	1883 aa		11.68	□□□□□ -0.54
PTPN7-204	ENST00000462815		A0A1B0GVT2	93 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	SLC12A8	A0AV02	714 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	GABBR2	O75899	941 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	EPHX1	P07099	455 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	ATXN1L	P0C7T5	689 aa	Known RBP	11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	HLA-E	P13747	358 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	GTF2H1	P32780	548 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	ACSL1	P33121	698 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	MATK	P42679	507 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	NDUFA8	P51970	172 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	PDE4C	Q08493	712 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	CAMK2B	Q13554	666 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	PKDCC	Q504Y2	493 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	KCNT1	Q5JUK3	1230 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	KRT39	Q6A163	491 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	TMPRSS7	Q7RTY8	843 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	CACUL1	Q86Y37	369 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	ANKRD52	Q8NB46	1076 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	SPRYD3	Q8NCJ5	442 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	OR2T3	Q8NH03	318 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	MDM1	Q8TC05	714 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	WFDC5	Q8TCV5	224 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	TATDN2	Q93075	761 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	MYO19	Q96H55	970 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	NUP58	Q9BVL2	599 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	ULBP1	Q9BZM6	244 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	OSGEP	Q9NPF4	335 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	DKK4	Q9UBT3	224 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	CFAP45	Q9UL16	551 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	MAPK8IP1	Q9UQF2	711 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	ZDHHC9	Q9Y397	364 aa		11.67	□□□□□ -0.54
PTPN7-204	ENST00000462815	CFAP46	Q8IYW2	2715 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	APC2	O95996	2303 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	NUMA1	Q14980	2115 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	XPO1	O14980	1071 aa	Known RBP	11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	SYNCRIP	O60506	623 aa	Known RBP	11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	KIF20A	O95235	890 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	CER1	O95813	267 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	ZBED1	O96006	694 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	IGLV3-27	P01718	113 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	PSMC2	P35998	433 aa	Known RBP	11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	CSNK1E	P49674	416 aa	Known RBP	11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	TKTL1	P51854	596 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	KIF19	Q2TAC6	998 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	CBWD6	Q4V339	395 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	SOWAHC	Q53LP3	525 aa	Predicted RBP	11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	CBWD3	Q5JTY5	395 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	CBWD5	Q5RIA9	395 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	C19orf48	Q6RUI8	117 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	IL27RA	Q6UWB1	636 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	SERPINA13P	Q6UXR4	307 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	MARCH9	Q86YJ5	346 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	FMNL3	Q8IVF7	1028 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	ARHGAP18	Q8N392	663 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	ZNF366	Q8N895	744 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	FBXL13	Q8NEE6	735 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	DDI1	Q8WTU0	396 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	UCMA	Q8WVF2	138 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	HEXIM2	Q96MH2	286 aa	Known RBP	11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	CIPC	Q9C0C6	399 aa		11.66	□□□□□ -0.54
PTPN7-204	ENST00000462815	MIR1-1HG	Q9H1L0	117 aa		11.66	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms