RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 DCLK3Q9C098 648 aa16.02■□□□□ 0.16
APP-211ENST00000462267 TMEM245Q9H330 911 aa16.02■□□□□ 0.16
APP-211ENST00000462267 GDF3Q9NR23 364 aa16.02■□□□□ 0.16
APP-211ENST00000462267 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.02■□□□□ 0.16
APP-211ENST00000462267 STK17AQ9UEE5 414 aa16.02■□□□□ 0.16
APP-211ENST00000462267 PLA2G4CQ9UP65 541 aa16.02■□□□□ 0.16
APP-211ENST00000462267 KIF3AQ9Y496 699 aa16.02■□□□□ 0.16
APP-211ENST00000462267 UNC79Q9P2D8 2635 aa16.01■□□□□ 0.15
APP-211ENST00000462267 MDM4O15151 490 aa16.01■□□□□ 0.15
APP-211ENST00000462267 BEST1O76090 585 aa16.01■□□□□ 0.15
APP-211ENST00000462267 BMP15O95972 392 aa16.01■□□□□ 0.15
APP-211ENST00000462267 DLATP10515 647 aaKnown RBP16.01■□□□□ 0.15
APP-211ENST00000462267 RARGP13631 454 aa16.01■□□□□ 0.15
APP-211ENST00000462267 E2F1Q01094 437 aa16.01■□□□□ 0.15
APP-211ENST00000462267 INSM1Q01101 510 aaPredicted RBP16.01■□□□□ 0.15
APP-211ENST00000462267 VAC14Q08AM6 782 aa16.01■□□□□ 0.15
APP-211ENST00000462267 TRPC3Q13507 836 aa16.01■□□□□ 0.15
APP-211ENST00000462267 ZNF276Q8N554 614 aa16.01■□□□□ 0.15
APP-211ENST00000462267 GOLGA1Q92805 767 aa16.01■□□□□ 0.15
APP-211ENST00000462267 SYAP1Q96A49 352 aaPredicted RBP16.01■□□□□ 0.15
APP-211ENST00000462267 SLC6A18Q96N87 628 aa16.01■□□□□ 0.15
APP-211ENST00000462267 XYLT2Q9H1B5 865 aa16.01■□□□□ 0.15
APP-211ENST00000462267 IL17BQ9UHF5 180 aa16.01■□□□□ 0.15
APP-211ENST00000462267 CYP26A1O43174 497 aa16■□□□□ 0.15
APP-211ENST00000462267 DXOO77932 396 aaKnown RBP16■□□□□ 0.15
APP-211ENST00000462267 WNT1P04628 370 aa16■□□□□ 0.15
APP-211ENST00000462267 ACP1P24666 158 aa16■□□□□ 0.15
APP-211ENST00000462267 MAP3K7CLP57077 242 aa16■□□□□ 0.15
APP-211ENST00000462267 MYL6P60660 151 aa16■□□□□ 0.15
APP-211ENST00000462267 COG7P83436 770 aa16■□□□□ 0.15
APP-211ENST00000462267 PDE4CQ08493 712 aa16■□□□□ 0.15
APP-211ENST00000462267 FNDC3BQ53EP0 1204 aaKnown RBP16■□□□□ 0.15
APP-211ENST00000462267 SFMBT2Q5VUG0 894 aa16■□□□□ 0.15
APP-211ENST00000462267 USP30Q70CQ3 517 aa16■□□□□ 0.15
APP-211ENST00000462267 SV2BQ7L1I2 683 aa16■□□□□ 0.15
APP-211ENST00000462267 KCNE4Q8WWG9 221 aa16■□□□□ 0.15
APP-211ENST00000462267 CGRRF1Q99675 332 aa16■□□□□ 0.15
APP-211ENST00000462267 DPH1Q9BZG8 443 aa16■□□□□ 0.15
APP-211ENST00000462267 NMUR1Q9HB89 426 aa16■□□□□ 0.15
APP-211ENST00000462267 PRSS16Q9NQE7 514 aa16■□□□□ 0.15
APP-211ENST00000462267 HSPBP1Q9NZL4 362 aa16■□□□□ 0.15
APP-211ENST00000462267 NUDT5Q9UKK9 219 aa16■□□□□ 0.15
APP-211ENST00000462267 CLEC4EQ9ULY5 219 aa16■□□□□ 0.15
APP-211ENST00000462267 NCKAP1Q9Y2A7 1128 aa16■□□□□ 0.15
APP-211ENST00000462267 A0A1W2PQH9 124 aa15.99■□□□□ 0.15
APP-211ENST00000462267 FRMD3A2A2Y4 597 aa15.99■□□□□ 0.15
APP-211ENST00000462267 MT-CO3P00414 261 aa15.99■□□□□ 0.15
APP-211ENST00000462267 IDEP14735 1019 aa15.99■□□□□ 0.15
APP-211ENST00000462267 CD38P28907 300 aa15.99■□□□□ 0.15
APP-211ENST00000462267 RXRGP48443 463 aa15.99■□□□□ 0.15
APP-211ENST00000462267 PSEN1P49768 467 aa15.99■□□□□ 0.15
APP-211ENST00000462267 ERVPABLB-1P60509 514 aa15.99■□□□□ 0.15
APP-211ENST00000462267 SNRNP35Q16560 246 aaKnown RBP15.99■□□□□ 0.15
APP-211ENST00000462267 KDM7AQ6ZMT4 941 aa15.99■□□□□ 0.15
APP-211ENST00000462267 PRICKLE2Q7Z3G6 844 aa15.99■□□□□ 0.15
APP-211ENST00000462267 ACOT1Q86TX2 421 aa15.99■□□□□ 0.15
APP-211ENST00000462267 CPXM2Q8N436 756 aa15.99■□□□□ 0.15
APP-211ENST00000462267 OXR1Q8N573 874 aa15.99■□□□□ 0.15
APP-211ENST00000462267 SLC2A14Q8TDB8 520 aa15.99■□□□□ 0.15
APP-211ENST00000462267 CDK5RAP1Q96SZ6 601 aaKnown RBP15.99■□□□□ 0.15
APP-211ENST00000462267 FGFBP2Q9BYJ0 223 aa15.99■□□□□ 0.15
APP-211ENST00000462267 SMYD3Q9H7B4 428 aa15.99■□□□□ 0.15
APP-211ENST00000462267 VRTNQ9H8Y1 702 aa15.99■□□□□ 0.15
APP-211ENST00000462267 ERVMER34-1Q9H9K5 563 aa15.99■□□□□ 0.15
APP-211ENST00000462267 AASDHPPTQ9NRN7 309 aa15.99■□□□□ 0.15
APP-211ENST00000462267 CCDC39Q9UFE4 941 aa15.99■□□□□ 0.15
APP-211ENST00000462267 SCML1Q9UN30 329 aa15.99■□□□□ 0.15
APP-211ENST00000462267 PCDHA5Q9Y5H7 936 aa15.99■□□□□ 0.15
APP-211ENST00000462267 KLK10O43240 276 aa15.98■□□□□ 0.15
APP-211ENST00000462267 UBR5O95071 2799 aaPredicted RBP15.98■□□□□ 0.15
APP-211ENST00000462267 RALAP11233 206 aa15.98■□□□□ 0.15
APP-211ENST00000462267 CCDC130P13994 396 aa15.98■□□□□ 0.15
APP-211ENST00000462267 CORO1AP31146 461 aaKnown RBP15.98■□□□□ 0.15
APP-211ENST00000462267 SFSWAPQ12872 951 aaKnown RBP15.98■□□□□ 0.15
APP-211ENST00000462267 PSMD6Q15008 389 aa15.98■□□□□ 0.15
APP-211ENST00000462267 ZNF776Q68DI1 518 aaPredicted RBP15.98■□□□□ 0.15
APP-211ENST00000462267 STXBP4Q6ZWJ1 553 aa15.98■□□□□ 0.15
APP-211ENST00000462267 GPRIN1Q7Z2K8 1008 aa15.98■□□□□ 0.15
APP-211ENST00000462267 ZNF366Q8N895 744 aa15.98■□□□□ 0.15
APP-211ENST00000462267 WFIKKN2Q8TEU8 576 aa15.98■□□□□ 0.15
APP-211ENST00000462267 DDI1Q8WTU0 396 aa15.98■□□□□ 0.15
APP-211ENST00000462267 COL12A1Q99715 3063 aa15.98■□□□□ 0.15
APP-211ENST00000462267 NAGPAQ9UK23 515 aa15.98■□□□□ 0.15
APP-211ENST00000462267 AGO1Q9UL18 857 aaKnown RBP15.98■□□□□ 0.15
APP-211ENST00000462267 ARID1BQ8NFD5 2236 aaPredicted RBP15.98■□□□□ 0.15
APP-211ENST00000462267 A0A1W2PR77 199 aa15.97■□□□□ 0.15
APP-211ENST00000462267 FAM47DPA6NHR8 397 aa15.97■□□□□ 0.15
APP-211ENST00000462267 MPOP05164 745 aa15.97■□□□□ 0.15
APP-211ENST00000462267 FAM200BP0CF97 657 aa15.97■□□□□ 0.15
APP-211ENST00000462267 LSSP48449 732 aa15.97■□□□□ 0.15
APP-211ENST00000462267 GALCP54803 685 aa15.97■□□□□ 0.15
APP-211ENST00000462267 NXPH1P58417 271 aa15.97■□□□□ 0.15
APP-211ENST00000462267 BNIP3Q12983 259 aa15.97■□□□□ 0.15
APP-211ENST00000462267 BMT2Q1RMZ1 405 aa15.97■□□□□ 0.15
APP-211ENST00000462267 SLC45A4Q5BKX6 768 aa15.97■□□□□ 0.15
APP-211ENST00000462267 COLEC12Q5KU26 742 aa15.97■□□□□ 0.15
APP-211ENST00000462267 KANSL1Q7Z3B3 1105 aa15.97■□□□□ 0.15
APP-211ENST00000462267 DENND1CQ8IV53 801 aa15.97■□□□□ 0.15
APP-211ENST00000462267 CRYBG2Q8N1P7 616 aa15.97■□□□□ 0.15
APP-211ENST00000462267 GANCQ8TET4 914 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms