RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 IL12RB1P42701 662 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 STARD3Q14849 445 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 EIF4HQ15056 248 aaKnown RBP19.74■□□□□ 0.75
VARS-220ENST00000461874 E2F5Q15329 346 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 NUGGCQ68CJ6 796 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 GJB7Q6PEY0 223 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 SYT12Q8IV01 421 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 SCUBE3Q8IX30 993 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 STK32AQ8WU08 396 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 ZNF606Q8WXB4 792 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 MRGPRX1Q96LB2 322 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 CLSTN2Q9H4D0 955 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 ST7Q9NRC1 585 aa19.74■□□□□ 0.75
VARS-220ENST00000461874 EVLQ9UI08 416 aaPredicted RBP19.74■□□□□ 0.75
VARS-220ENST00000461874 NUP205Q92621 2012 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 IGHV1OR15-9A0A0B4J2B8 117 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 SART1O43290 800 aaKnown RBP19.73■□□□□ 0.75
VARS-220ENST00000461874 MED7O43513 233 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 LETM1O95202 739 aaPredicted RBP19.73■□□□□ 0.75
VARS-220ENST00000461874 ADRB1P08588 477 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 DPP6P42658 865 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 ACADSBP45954 432 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 TBX4P57082 545 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 IRX4P78413 519 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 RPL6Q02878 288 aaKnown RBP19.73■□□□□ 0.75
VARS-220ENST00000461874 RING1Q06587 406 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 FUT11Q495W5 492 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 LYSMD4Q5XG99 296 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 TMEM215Q68D42 235 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 GBP6Q6ZN66 633 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 UNC45BQ8IWX7 931 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 LSM14BQ9BX40 385 aaKnown RBP19.73■□□□□ 0.75
VARS-220ENST00000461874 SLC4A5Q9BY07 1137 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 CIPCQ9C0C6 399 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 SLC6A17Q9H1V8 727 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 ACP6Q9NPH0 428 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 TMEM74BQ9NUR3 256 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 PILRBQ9UKJ0 227 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 CYP8B1Q9UNU6 501 aa19.73■□□□□ 0.75
VARS-220ENST00000461874 GTPBP10A4D1E9 387 aaKnown RBP19.72■□□□□ 0.75
VARS-220ENST00000461874 C4orf47A7E2U8 309 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 BECN2A8MW95 431 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 NCAM1P13591 858 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 ITPKAP23677 461 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 HLA-FP30511 346 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 GNA15P30679 374 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 SLC11A2P49281 568 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 APBA1Q02410 837 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 ZNF234Q14588 700 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 EXOC3L4Q17RC7 722 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 DEFB119Q8N690 84 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 DQX1Q8TE96 717 aaKnown RBP19.72■□□□□ 0.75
VARS-220ENST00000461874 SORCS1Q8WY21 1168 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 AZIN2Q96A70 460 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 IRX2Q9BZI1 471 aaPredicted RBP19.72■□□□□ 0.75
VARS-220ENST00000461874 APEX2Q9UBZ4 518 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 CYTH4Q9UIA0 394 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 PLXND1Q9Y4D7 1925 aa19.72■□□□□ 0.75
VARS-220ENST00000461874 GOLGA6L7A0A1B0GV03 622 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 THAP12O43422 761 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 ACSL4O60488 711 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 PON1P27169 355 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 HOXD12P35452 270 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 MTIF2P46199 727 aaKnown RBP19.71■□□□□ 0.75
VARS-220ENST00000461874 SGSHP51688 502 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 ARHGAP44Q17R89 818 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 FAM133BQ5BKY9 247 aaKnown RBP19.71■□□□□ 0.75
VARS-220ENST00000461874 TRIM61Q5EBN2 209 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 MPP7Q5T2T1 576 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 PIK3R6Q5UE93 754 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 PEAR1Q5VY43 1037 aaPredicted RBP19.71■□□□□ 0.75
VARS-220ENST00000461874 RFWD3Q6PCD5 774 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 KIAA1324Q6UXG2 1013 aaKnown RBP19.71■□□□□ 0.75
VARS-220ENST00000461874 BEND5Q7L4P6 421 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 TMEM110Q86TL2 294 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 METTL3Q86U44 580 aaKnown RBP19.71■□□□□ 0.75
VARS-220ENST00000461874 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.71■□□□□ 0.75
VARS-220ENST00000461874 WFIKKN2Q8TEU8 576 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 FAM149B1Q96BN6 582 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 FCRL2Q96LA5 508 aaPredicted RBP19.71■□□□□ 0.75
VARS-220ENST00000461874 MKRN2Q9H000 416 aaKnown RBP19.71■□□□□ 0.75
VARS-220ENST00000461874 THAP9Q9H5L6 903 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 PRDM16Q9HAZ2 1276 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 CD93Q9NPY3 652 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 NAALADL1Q9UQQ1 740 aa19.71■□□□□ 0.75
VARS-220ENST00000461874 CDX4O14627 284 aaPredicted RBP19.7■□□□□ 0.74
VARS-220ENST00000461874 IRAK2O43187 625 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 PAPSS1O43252 624 aaPredicted RBP19.7■□□□□ 0.74
VARS-220ENST00000461874 SYNCRIPO60506 623 aaKnown RBP19.7■□□□□ 0.74
VARS-220ENST00000461874 PRKCHP24723 683 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 SLC6A4P31645 630 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 USP8P40818 1118 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 ZNF33AQ06730 810 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 NNTQ13423 1086 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 TPD52L1Q16890 204 aaPredicted RBP19.7■□□□□ 0.74
VARS-220ENST00000461874 SMYD5Q6GMV2 418 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 KIAA0907Q7Z7F0 614 aaPredicted RBP19.7■□□□□ 0.74
VARS-220ENST00000461874 SHC3Q92529 594 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 SERPINB11Q96P15 392 aa19.7■□□□□ 0.74
VARS-220ENST00000461874 TMEM9BQ9NQ34 198 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms