RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 ATRIPQ8WXE1 791 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 DCLK3Q9C098 648 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 LACRTQ9GZZ8 138 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 KCNF1Q9H3M0 494 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 EBF3Q9H4W6 596 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 TRPV5Q9NQA5 729 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 TMPRSS4Q9NRS4 437 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 ARHGEF38Q9NXL2 777 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 TBC1D14Q9P2M4 693 aa11.71□□□□□ -0.53
SSBP1-202ENST00000461433 LSM7Q9UK45 103 aaKnown RBP11.71□□□□□ -0.53
SSBP1-202ENST00000461433 SLC9A3R1O14745 358 aaPredicted RBP11.71□□□□□ -0.54
SSBP1-202ENST00000461433 PJA2O43164 708 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 LATS1O95835 1130 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 PSMA2P25787 234 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 CCR1P32246 355 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 RDXP35241 583 aaKnown RBP11.71□□□□□ -0.54
SSBP1-202ENST00000461433 VAV2P52735 878 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 PDGFRLQ15198 375 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 FAM133BQ5BKY9 247 aaKnown RBP11.71□□□□□ -0.54
SSBP1-202ENST00000461433 ARTNQ5T4W7 220 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 RHBDF2Q6PJF5 856 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 FAM131BQ86XD5 332 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 RFFLQ8WZ73 363 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 IRF7Q92985 503 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 OTUB2Q96DC9 234 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 CHFRQ96EP1 664 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 TKTL2Q9H0I9 626 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 WDCPQ9H6R7 721 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 BRD9Q9H8M2 597 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 GTSE1Q9NYZ3 720 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 CTTNBP2NLQ9P2B4 639 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 SALL4Q9UJQ4 1053 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 ANAPC7Q9UJX3 599 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 ZNF510Q9Y2H8 683 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 ADGRG1Q9Y653 693 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 DUSP10Q9Y6W6 482 aa11.71□□□□□ -0.54
SSBP1-202ENST00000461433 GOLGA6L7A0A1B0GV03 622 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 SHISA7A6NL88 538 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 ACSL4O60488 711 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 SLC2A3P11169 496 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 SLC6A4P31645 630 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 IFNAR2P48551 515 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 CCDC173Q0VFZ6 552 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 RUNX3Q13761 415 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 GAB4Q2WGN9 574 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 BRMS1LQ5PSV4 323 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 ADGRF1Q5T601 910 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 PIK3R6Q5UE93 754 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 DAB2IPQ5VWQ8 1189 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 TMEM25Q86YD3 366 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 CPNE8Q86YQ8 564 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 RHOT2Q8IXI1 618 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 NIPA2Q8N8Q9 360 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 DNASE1L2Q92874 299 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 MYEOVQ96EZ4 313 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 BTN2A3PQ96KV6 586 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 ZNF830Q96NB3 372 aaPredicted RBP11.7□□□□□ -0.54
SSBP1-202ENST00000461433 PRMT1Q99873 361 aaKnown RBP11.7□□□□□ -0.54
SSBP1-202ENST00000461433 MAGEB5Q9BZ81 275 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 MUC3AQ02505 3323 aa11.7□□□□□ -0.54
SSBP1-202ENST00000461433 A0A0A6YYK5 440 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-202ENST00000461433 MYO1FO00160 1098 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 LRCH4O75427 683 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 PAGE1O75459 146 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 IPO7O95373 1038 aaKnown RBP11.69□□□□□ -0.54
SSBP1-202ENST00000461433 MOCS2O96007 188 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-202ENST00000461433 APOEP02649 317 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 CYP17A1P05093 508 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 TCF4P15884 667 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 ADRA1BP35368 520 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 VCPP55072 806 aaKnown RBP11.69□□□□□ -0.54
SSBP1-202ENST00000461433 HADHBP55084 474 aaKnown RBP11.69□□□□□ -0.54
SSBP1-202ENST00000461433 KRT83P78385 493 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 PIGHQ14442 188 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-202ENST00000461433 ACAP1Q15027 740 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 DHCR24Q15392 516 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 CYP4V2Q6ZWL3 525 aaPredicted RBP11.69□□□□□ -0.54
SSBP1-202ENST00000461433 SND1Q7KZF4 910 aaKnown RBP eCLIP11.69□□□□□ -0.54
SSBP1-202ENST00000461433 CPXM2Q8N436 756 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 CCDC185Q8N715 623 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 ATP6V0D2Q8N8Y2 350 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 TTC8Q8TAM2 541 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 ATP2A3Q93084 1043 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 RNF34Q969K3 372 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 PEBP4Q96S96 227 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 ECT2Q9H8V3 914 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 LUC7LQ9NQ29 371 aaKnown RBP11.69□□□□□ -0.54
SSBP1-202ENST00000461433 SPHK2Q9NRA0 654 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 TMEM51Q9NW97 253 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 IP6K2Q9UHH9 426 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 MIA3Q5JRA6 1907 aa11.69□□□□□ -0.54
SSBP1-202ENST00000461433 BTNL10A8MVZ5 291 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 DLL1O00548 723 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 TRDMT1O14717 391 aaKnown RBP11.68□□□□□ -0.54
SSBP1-202ENST00000461433 CHKAP35790 457 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 SLC11A2P49281 568 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 SGSHP51688 502 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 MLLT6P55198 1093 aaPredicted RBP11.68□□□□□ -0.54
SSBP1-202ENST00000461433 ZXDAP98168 799 aa11.68□□□□□ -0.54
SSBP1-202ENST00000461433 ITPRIPL2Q3MIP1 535 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms