RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 GALTP07902 379 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 RAG1P15918 1043 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 NR1D1P20393 614 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 IVDP26440 423 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 RBL1P28749 1068 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 STIP1P31948 543 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 RFC2P35250 354 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 ADRA1BP35368 520 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 MAGEA4P43358 317 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 SLCO1A2P46721 670 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 GCGRP47871 477 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 NR2C2P49116 596 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 ATP1A2P50993 1020 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 AIF1P55008 147 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 AP1B1Q10567 949 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 PDIA2Q13087 525 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 GPNMBQ14956 572 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 HIF1AQ16665 826 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 KYNUQ16719 465 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 BBS9Q3SYG4 887 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 RNASEH2BQ5TBB1 312 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 AGBL2Q5U5Z8 902 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 OTUD1Q5VV17 481 aaPredicted RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 SLC9A4Q6AI14 798 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 RWDD4Q6NW29 188 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 RHBDF2Q6PJF5 856 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 PRSS55Q6UWB4 352 aaPredicted RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 VSTM1Q6UX27 236 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 PPP1R21Q6ZMI0 780 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 RFX8Q6ZV50 586 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 ANKS3Q6ZW76 656 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 ANKMY2Q8IV38 441 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 ZBED8Q8IZ13 594 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 NUP93Q8N1F7 819 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 ARHGAP18Q8N392 663 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 ZCCHC9Q8N567 271 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 ARFGAP2Q8N6H7 521 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 STKLD1Q8NE28 680 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 DQX1Q8TE96 717 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 LRRN4Q8WUT4 740 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 TFB1MQ8WVM0 346 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 MRRFQ96E11 262 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 FUBP3Q96I24 572 aaKnown RBP eCLIP7.03□□□□□ -1.28
MSH2-204ENST00000461394 PAWRQ96IZ0 340 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 C9orf72Q96LT7 481 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 TTC25Q96NG3 672 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 PKMYT1Q99640 499 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 SELENOSQ9BQE4 189 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 TTPALQ9BTX7 342 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 C11orf84Q9BUA3 381 aaPredicted RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 MAGEB5Q9BZ81 275 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 TXLNGYQ9BZA5 131 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 GPR62Q9BZJ7 368 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 KLC2Q9H0B6 622 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 TKTL2Q9H0I9 626 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 SIK2Q9H0K1 926 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 FBXO44Q9H4M3 255 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 PRDM16Q9HAZ2 1276 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 MARCH5Q9NX47 278 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 NINJ2Q9NZG7 142 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 CALCOCO1Q9P1Z2 691 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 RCOR3Q9P2K3 495 aaPredicted RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 ADAM21Q9UKJ8 722 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 MAGED2Q9UNF1 606 aaPredicted RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 NOVA2Q9UNW9 492 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 SHOC2Q9UQ13 582 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 SLC27A5Q9Y2P5 690 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.03□□□□□ -1.28
MSH2-204ENST00000461394 TTC3P53804 2025 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 TET1Q8NFU7 2136 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 SRCAPQ6ZRS2 3230 aa7.03□□□□□ -1.28
MSH2-204ENST00000461394 A0A087WUV0 522 aaPredicted RBP7.02□□□□□ -1.29
MSH2-204ENST00000461394 BCLAF3A2AJT9 711 aaKnown RBP7.02□□□□□ -1.29
MSH2-204ENST00000461394 MTMR11A4FU01 709 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 ZBBXA8MT70 800 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 HACD1B0YJ81 288 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 F5H423 210 aaPredicted RBP7.02□□□□□ -1.29
MSH2-204ENST00000461394 SMAPO00193 183 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 MFSD11O43934 449 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 SOAT2O75908 522 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 NEBLO76041 1014 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 RTN3O95197 1032 aaPredicted RBP7.02□□□□□ -1.29
MSH2-204ENST00000461394 TTC4O95801 387 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 APOEP02649 317 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 FYNP06241 537 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 NUDT17P0C025 328 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 SRGAP2BP0DMP2 458 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 ATP2A2P16615 1042 aaKnown RBP7.02□□□□□ -1.29
MSH2-204ENST00000461394 FGFR3P22607 806 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 IL4RP24394 825 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 YWHAQP27348 245 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 ATP5DP30049 168 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 PHBP35232 272 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 MAGEA11P43364 429 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 RPL10AP62906 217 aaKnown RBP7.02□□□□□ -1.29
MSH2-204ENST00000461394 PPARDQ03181 441 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 GBE1Q04446 702 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 XRCC4Q13426 336 aa7.02□□□□□ -1.29
MSH2-204ENST00000461394 BTG3Q14201 252 aaPredicted RBP7.02□□□□□ -1.29
MSH2-204ENST00000461394 PDK1Q15118 436 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms