RNA–Protein interactions for RNA: ENST00000461343.1

LSG1-205, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 2

Gene LSG1, Length 428 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-205ENST00000461343 SIX1Q15475 284 aaPredicted RBP7.72□□□□□ -1.17
LSG1-205ENST00000461343 TAF5Q15542 800 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 OASLQ15646 514 aaKnown RBP7.72□□□□□ -1.17
LSG1-205ENST00000461343 DDR2Q16832 855 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 ANO4Q32M45 955 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 SLC45A4Q5BKX6 768 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 RABGAP1LQ5R372 815 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 C10orf120Q5SQS8 335 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 TMEM240Q5SV17 173 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 ITPRIPL1Q6GPH6 555 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 LRIG3Q6UXM1 1119 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 RNF19BQ6ZMZ0 732 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 TMC7Q7Z402 723 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 TAC4Q86UU9 113 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 CCDC117Q8IWD4 279 aaPredicted RBP7.72□□□□□ -1.17
LSG1-205ENST00000461343 PPIL6Q8IXY8 311 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 TMEM130Q8N3G9 435 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 ARFGAP1Q8N6T3 406 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 PLD5Q8N7P1 536 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 KIAA1958Q8N8K9 716 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 ZNF557Q8N988 423 aaPredicted RBP7.72□□□□□ -1.17
LSG1-205ENST00000461343 ATAD1Q8NBU5 361 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 LRRN4CLQ8ND94 238 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 CLEC4CQ8WTT0 213 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 NSMCE1Q8WV22 266 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 C1orf54Q8WWF1 131 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 RTP4Q96DX8 246 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 PIWIL1Q96J94 861 aaKnown RBP7.72□□□□□ -1.17
LSG1-205ENST00000461343 PGLYRP2Q96PD5 576 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 LPIN3Q9BQK8 851 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 TKTL2Q9H0I9 626 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 LMAN2LQ9H0V9 348 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 ZBP1Q9H171 429 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 ENTPD7Q9NQZ7 604 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 PIGVQ9NUD9 493 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.72□□□□□ -1.17
LSG1-205ENST00000461343 SMARCAL1Q9NZC9 954 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 MARCH2Q9P0N8 246 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 PPARGC1AQ9UBK2 798 aaKnown RBP7.72□□□□□ -1.17
LSG1-205ENST00000461343 OR12D3Q9UGF7 316 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 DMGDHQ9UI17 866 aaKnown RBP7.72□□□□□ -1.17
LSG1-205ENST00000461343 TRHDEQ9UKU6 1024 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 TPX2Q9ULW0 747 aaKnown RBP7.72□□□□□ -1.17
LSG1-205ENST00000461343 NFU1Q9UMS0 254 aa7.72□□□□□ -1.17
LSG1-205ENST00000461343 A0A1W2PQH9 124 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 FAM170AA1A519 330 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 WDR27A2RRH5 827 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 NT5C1B-RDH14C9J2C7 533 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 BHMG1C9JSJ3 638 aaPredicted RBP7.71□□□□□ -1.18
LSG1-205ENST00000461343 CREB3O43889 395 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 TLR5O60602 858 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 XYLBO75191 536 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 GABBR2O75899 941 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 NEBLO76041 1014 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 SEC31AO94979 1220 aaKnown RBP7.71□□□□□ -1.18
LSG1-205ENST00000461343 GLUD1P00367 558 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 IFNB1P01574 187 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 HNRNPA1P09651 372 aaKnown RBP eCLIP7.71□□□□□ -1.18
LSG1-205ENST00000461343 OR4Q2P0C623 313 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 ZDHHC11BP0C7U3 371 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 ACRP10323 421 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 KRT10P13645 584 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 EPHB2P29323 1055 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 PHBP35232 272 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 HSPA9P38646 679 aaKnown RBP7.71□□□□□ -1.18
LSG1-205ENST00000461343 PTGIRP43119 386 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 ARL4CP56559 192 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 DYNLT1P63172 113 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 IFRD2Q12894 506 aaPredicted RBP7.71□□□□□ -1.18
LSG1-205ENST00000461343 TAF10Q12962 218 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 SNX1Q13596 522 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 PRPSAP1Q14558 356 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 RAB30Q15771 203 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 TCTN1Q2MV58 587 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 ARHGAP15Q53QZ3 475 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 DNAJC21Q5F1R6 531 aaKnown RBP7.71□□□□□ -1.18
LSG1-205ENST00000461343 SYPL2Q5VXT5 272 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 DENND2CQ68D51 928 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 TRNP1Q6NT89 227 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 FAM117BQ6P1L5 589 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 ARHGEF18Q6ZSZ5 1173 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 CYP4V2Q6ZWL3 525 aaPredicted RBP7.71□□□□□ -1.18
LSG1-205ENST00000461343 CENPUQ71F23 418 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 GPRIN1Q7Z2K8 1008 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 RELL1Q8IUW5 271 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 CCNJLQ8IV13 435 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 PDIK1LQ8N165 341 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 KRT222Q8N1A0 295 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 BBS5Q8N3I7 341 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 SCAMP5Q8TAC9 235 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 CASKIN2Q8WXE0 1202 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 EDEM1Q92611 657 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 MRPS31Q92665 395 aaKnown RBP7.71□□□□□ -1.18
LSG1-205ENST00000461343 DPF3Q92784 378 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 ART4Q93070 314 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 FATE1Q969F0 183 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 PSMG2Q969U7 264 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 LRRC39Q96DD0 335 aa7.71□□□□□ -1.18
LSG1-205ENST00000461343 QKIQ96PU8 341 aaKnown RBP eCLIP7.71□□□□□ -1.18
LSG1-205ENST00000461343 PEBP4Q96S96 227 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms