RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 FAM200BP0CF97 657 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 RALAP11233 206 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 P4HA1P13674 534 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 STAT6P42226 847 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 COG7P83436 770 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 ZBTB16Q05516 673 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 BIRC3Q13489 604 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 TTC31Q49AM3 519 aaPredicted RBP18.06■□□□□ 0.48
TOP3A-202ENST00000461127 SCARA5Q6ZMJ2 495 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 TMEM176AQ96HP8 235 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 VRTNQ9H8Y1 702 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 SGK2Q9HBY8 427 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 NAGPAQ9UK23 515 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 NUDT5Q9UKK9 219 aa18.06■□□□□ 0.48
TOP3A-202ENST00000461127 MGAQ8IWI9 3026 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 DNTTP04053 509 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 CYP2J2P51589 502 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 CLDN6P56747 220 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 RACK1P63244 317 aaKnown RBP18.05■□□□□ 0.48
TOP3A-202ENST00000461127 KRT85P78386 507 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 TLE3Q04726 772 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 DNM1Q05193 864 aaKnown RBP18.05■□□□□ 0.48
TOP3A-202ENST00000461127 CCDC173Q0VFZ6 552 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 DNAJC3Q13217 504 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 FNDC3BQ53EP0 1204 aaKnown RBP18.05■□□□□ 0.48
TOP3A-202ENST00000461127 KCNT1Q5JUK3 1230 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 ATL3Q6DD88 541 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 GATAD2AQ86YP4 633 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 XXYLT1Q8NBI6 393 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 DDI1Q8WTU0 396 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 SORCS1Q8WY21 1168 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 JAKMIP2Q96AA8 810 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 ELF4Q99607 663 aaPredicted RBP18.05■□□□□ 0.48
TOP3A-202ENST00000461127 CLMPQ9H6B4 373 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 NMUR1Q9HB89 426 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 CFAP45Q9UL16 551 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 PLA2G4CQ9UP65 541 aa18.05■□□□□ 0.48
TOP3A-202ENST00000461127 MYLKQ15746 1914 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 VILLO15195 856 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 EIF3DO15371 548 aaKnown RBP eCLIP18.04■□□□□ 0.48
TOP3A-202ENST00000461127 YKT6O15498 198 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 KLKB1P03952 638 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 CORO1AP31146 461 aaKnown RBP18.04■□□□□ 0.48
TOP3A-202ENST00000461127 ACADVLP49748 655 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 BMT2Q1RMZ1 405 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 GPRIN1Q7Z2K8 1008 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 ZNF276Q8N554 614 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 ZNF516Q92618 1163 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 WBP1Q96G27 269 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 P2RY11Q96G91 374 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 AGPAT3Q9NRZ7 376 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 FAM49BQ9NUQ9 324 aa18.04■□□□□ 0.48
TOP3A-202ENST00000461127 SRPRBQ9Y5M8 271 aaKnown RBP18.04■□□□□ 0.48
TOP3A-202ENST00000461127 ATMQ13315 3056 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 CYSRT1A8MQ03 144 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 GOLGA6L22H0YM25 854 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 BRINP1O60477 761 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 ADORA2BP29275 332 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 AP3M2P53677 418 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 SNRPFP62306 86 aaKnown RBP18.03■□□□□ 0.48
TOP3A-202ENST00000461127 RHDQ02161 417 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 ILKQ13418 452 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 NCOA4Q13772 614 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 FBXL19Q6PCT2 694 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 SPACA3Q8IXA5 215 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 CRYBG2Q8N1P7 616 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 CPXM2Q8N436 756 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 RBBP8NLQ8NC74 664 aaPredicted RBP18.03■□□□□ 0.48
TOP3A-202ENST00000461127 GOLGA1Q92805 767 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 LGMNQ99538 433 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 LRRC27Q9C0I9 530 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 PNPLA8Q9NP80 782 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 TFIP11Q9UBB9 837 aaKnown RBP18.03■□□□□ 0.48
TOP3A-202ENST00000461127 RASAL2Q9UJF2 1139 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 FBXO2Q9UK22 296 aaPredicted RBP18.03■□□□□ 0.48
TOP3A-202ENST00000461127 NCKAP1Q9Y2A7 1128 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 HECTD1Q9ULT8 2610 aa18.03■□□□□ 0.48
TOP3A-202ENST00000461127 TP53BP1Q12888 1972 aaPredicted RBP18.02■□□□□ 0.48
TOP3A-202ENST00000461127 CBX4O00257 560 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 CLIC2O15247 247 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 HMBSP08397 361 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 HOXD13P35453 343 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 NDST1P52848 882 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 RPS14P62263 151 aaKnown RBP18.02■□□□□ 0.48
TOP3A-202ENST00000461127 CEBPZQ03701 1054 aaKnown RBP18.02■□□□□ 0.48
TOP3A-202ENST00000461127 TBC1D25Q3MII6 688 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 BROXQ5VW32 411 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 TMEM215Q68D42 235 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 KIAA0895LQ68EN5 471 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 PCSK4Q6UW60 755 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 CLEC17AQ6ZS10 378 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 CLEC20AQ6ZU45 233 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 UNC93AQ86WB7 457 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 DENND1CQ8IV53 801 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 EID2Q8N6I1 236 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 C12orf29Q8N999 325 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 WFIKKN2Q8TEU8 576 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 CLIC6Q96NY7 704 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 ARID3AQ99856 593 aa18.02■□□□□ 0.48
TOP3A-202ENST00000461127 PANK2Q9BZ23 570 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms