RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 BMPR1AP36894 532 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 SCNN1GP51170 649 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 CLCN2P51788 898 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 ARFIP2P53365 341 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 TBCCQ15814 346 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 RNASEH2BQ5TBB1 312 aaKnown RBP16.32■□□□□ 0.2
CMTM3-203ENST00000460097 ALKAL1Q6UXT8 129 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 BANPQ8N9N5 519 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 MZB1Q8WU39 189 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 EZH1Q92800 747 aaPredicted RBP16.32■□□□□ 0.2
CMTM3-203ENST00000460097 NKD2Q969F2 451 aaPredicted RBP16.32■□□□□ 0.2
CMTM3-203ENST00000460097 HAPLN3Q96S86 360 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 CBWD1Q9BRT8 395 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 C17orf80Q9BSJ5 609 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 PCIF1Q9H4Z3 704 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 MANSC1Q9H8J5 431 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 RPF1Q9H9Y2 349 aaKnown RBP16.32■□□□□ 0.2
CMTM3-203ENST00000460097 PCDH9Q9HC56 1237 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 KRT82Q9NSB4 513 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 ARL8BQ9NVJ2 186 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 ZDHHC7Q9NXF8 308 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 HCSTQ9UBK5 93 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 COMMD3-BMI1R4GMX3 469 aa16.32■□□□□ 0.2
CMTM3-203ENST00000460097 CDH23Q9H251 3354 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 THP07101 528 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 CRABP2P29373 138 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 TNFSF9P41273 254 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 ACOT2P49753 483 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 XIAPP98170 497 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 HNRNPDQ14103 355 aaKnown RBP16.31■□□□□ 0.2
CMTM3-203ENST00000460097 SLC10A6Q3KNW5 377 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 XKR4Q5GH76 650 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 ZBTB41Q5SVQ8 909 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 LIN9Q5TKA1 542 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 SPRED2Q7Z698 418 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 ZC3H18Q86VM9 953 aaKnown RBP16.31■□□□□ 0.2
CMTM3-203ENST00000460097 ZNF280BQ86YH2 543 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 TMPRSS6Q8IU80 811 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 C4orf33Q8N1A6 199 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 RDH13Q8NBN7 331 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 FBXL13Q8NEE6 735 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 ARNTL2Q8WYA1 636 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 SEMA4DQ92854 862 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 MAK16Q9BXY0 300 aaKnown RBP16.31■□□□□ 0.2
CMTM3-203ENST00000460097 MIS12Q9H081 205 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 NRDE2Q9H7Z3 1164 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 PLEKHA5Q9HAU0 1116 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 TAS2R1Q9NYW7 299 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 HEY2Q9UBP5 337 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 CPSF3Q9UKF6 684 aaKnown RBP16.31■□□□□ 0.2
CMTM3-203ENST00000460097 SCINQ9Y6U3 715 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 CHD7Q9P2D1 2997 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 POC1B-GALNT4F8VUJ3 575 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 DDHD2O94830 711 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 RB1P06400 928 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 ITGAVP06756 1048 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 LAG3P18627 525 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 KRT4P19013 534 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 CTNNB1P35222 781 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 ALDH7A1P49419 539 aaKnown RBP16.31■□□□□ 0.2
CMTM3-203ENST00000460097 SEPT7Q16181 437 aaKnown RBP16.31■□□□□ 0.2
CMTM3-203ENST00000460097 MON1BQ7L1V2 547 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 GSTA5Q7RTV2 222 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 PRUNE1Q86TP1 453 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 ATP11CQ8NB49 1132 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 FAM81AQ8TBF8 368 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 SNX27Q96L92 541 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 MFSD14AQ96MC6 490 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 FBXL18Q96ME1 805 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 FAM161BQ96MY7 647 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 EPAS1Q99814 870 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 FAM213AQ9BRX8 229 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 CENPKQ9BS16 269 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 CXCL16Q9H2A7 254 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 ACSS3Q9H6R3 686 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 KCNK13Q9HB14 408 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 RAB20Q9NX57 234 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 RABGEF1Q9UJ41 708 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 PCDHB12Q9Y5F1 795 aa16.31■□□□□ 0.2
CMTM3-203ENST00000460097 SMIM28A0A1B0GU29 152 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 E7ESA3 106 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 PTGESO14684 152 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 ALDH2P05091 517 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 LYNP07948 512 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 DLDP09622 509 aaKnown RBP16.3■□□□□ 0.2
CMTM3-203ENST00000460097 CXCL8P10145 99 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 ESRRAP11474 423 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-203ENST00000460097 VPS41P49754 854 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 ADCY1Q08828 1119 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 PRKD1Q15139 912 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-203ENST00000460097 DNAL1Q4LDG9 190 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 TMCO4Q5TGY1 634 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 PLEKHA7Q6IQ23 1121 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 AAGABQ6PD74 315 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 KCNT2Q6UVM3 1135 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 MYLK4Q86YV6 388 aaPredicted RBP16.3■□□□□ 0.2
CMTM3-203ENST00000460097 PHC3Q8NDX5 983 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 CCDC110Q8TBZ0 833 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 TSSK1BQ9BXA7 367 aa16.3■□□□□ 0.2
CMTM3-203ENST00000460097 EPB41L1Q9H4G0 881 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms