RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 IFNB1P01574 187 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 CKMP06732 381 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 SPATA31D3P0C874 917 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 ITIH2P19823 946 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 GABRR2P28476 465 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 L1CAMP32004 1257 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 COILP38432 576 aaPredicted RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 CDKN2BP42772 138 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 CXCR3P49682 368 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 EPHB4P54760 987 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 HDAC4P56524 1084 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 TAS2R40P59535 323 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 ERVK-21P61565 698 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 OGDHQ02218 1023 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 SLC25A11Q02978 314 aaKnown RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 RING1Q06587 406 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 XRCC4Q13426 336 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 ELF2Q15723 593 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 DPYSL2Q16555 572 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 HSP90B2PQ58FF3 399 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 COL13A1Q5TAT6 717 aaPredicted RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 TIGD7Q6NT04 549 aaPredicted RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 CES5AQ6NT32 575 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 KLHDC10Q6PID8 442 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 C1orf228Q6PIY5 440 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 MFSD7Q6UXD7 560 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 EP400NLQ6ZTU2 488 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 SPATA31D4Q6ZUB0 917 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 NUDT18Q6ZVK8 323 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 BBS12Q6ZW61 710 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF572Q7Z3I7 529 aaPredicted RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 TMEM173Q86WV6 379 aaPredicted RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 RNF168Q8IYW5 571 aaPredicted RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 TDHQ8IZJ6 230 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 PAF1Q8N7H5 531 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF557Q8N988 423 aaPredicted RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 EIF1ADQ8N9N8 165 aaKnown RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 ADAM32Q8TC27 787 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 SPPL3Q8TCT6 385 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 DQX1Q8TE96 717 aaKnown RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 TFB1MQ8WVM0 346 aaKnown RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 C1orf54Q8WWF1 131 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 AUTS2Q8WXX7 1259 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 ARNTL2Q8WYA1 636 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 CASP10Q92851 521 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 NT5C3BQ969T7 300 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 TBC1D31Q96DN5 1066 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 C1orf74Q96LT6 269 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 MYRFLQ96LU7 910 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 RNF157Q96PX1 679 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 CCDC77Q9BR77 488 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 C17orf80Q9BSJ5 609 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 LRRC1Q9BTT6 524 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 TTLL2Q9BWV7 592 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 TRIM7Q9C029 511 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 DDX47Q9H0S4 455 aaKnown RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 OSBPL2Q9H1P3 480 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 LRRC19Q9H756 370 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 RC3H2Q9HBD1 1191 aaKnown RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 EPB41L5Q9HCM4 733 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 DZANK1Q9NVP4 752 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 KLHL11Q9NVR0 708 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZDHHC7Q9NXF8 308 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 HCSTQ9UBK5 93 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 PCYOX1Q9UHG3 505 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 SFMBT1Q9UHJ3 866 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 AMACRQ9UHK6 382 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 NME7Q9Y5B8 376 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 V9GYY5 206 aaPredicted RBP6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 PLXNA3P51805 1871 aa6.04□□□□□ -1.44
RNU1-88P-201ENST00000459274 DENND4CQ5VZ89 1909 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 NUP205Q92621 2012 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 CCDC195A0A1B0GUA6 201 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ARHGAP42A6NI28 874 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 PAGE1O75459 146 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 TADA3O75528 432 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZMYND10O75800 440 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 SOAT2O75908 522 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 KRT14P02533 472 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ITGAVP06756 1048 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 HMBSP08397 361 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 C7P10643 843 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 RBP3P10745 1247 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 KRT10P13645 584 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 IGFBP6P24592 240 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 HOXA9P31269 272 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 BMP8BP34820 402 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 CACNA2D1P54289 1103 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 OTUD4Q01804 1114 aaKnown RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 AP1B1Q10567 949 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 SCAPQ12770 1279 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 ZNF177Q13360 481 aaPredicted RBP6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 MTMR3Q13615 1198 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 DPYSL3Q14195 570 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 SLMAPQ14BN4 828 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 E2F5Q15329 346 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 LLGL1Q15334 1064 aa6.03□□□□□ -1.44
RNU1-88P-201ENST00000459274 P3H1Q32P28 736 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms