RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 FAM102AQ5T9C2 384 aaPredicted RBP16.79■□□□□ 0.28
CD28-203ENST00000458610 FYB2Q5VWT5 728 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 NAIF1Q69YI7 327 aaPredicted RBP16.79■□□□□ 0.28
CD28-203ENST00000458610 SDE2Q6IQ49 451 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 SND1Q7KZF4 910 aaKnown RBP eCLIP16.79■□□□□ 0.28
CD28-203ENST00000458610 SYT13Q7L8C5 426 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 ARCQ7LC44 396 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 TAC4Q86UU9 113 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 C12orf40Q86WS4 652 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 XYLT1Q86Y38 959 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 CCDC117Q8IWD4 279 aaPredicted RBP16.79■□□□□ 0.28
CD28-203ENST00000458610 CAMKK1Q8N5S9 505 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 TERB1Q8NA31 727 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 RPLP0P6Q8NHW5 317 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 ADAM32Q8TC27 787 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 USP33Q8TEY7 942 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 BTN2A3PQ96KV6 586 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 FCRL2Q96LA5 508 aaPredicted RBP16.79■□□□□ 0.28
CD28-203ENST00000458610 DDIT4Q9NX09 232 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 AIPL1Q9NZN9 384 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 FBXO10Q9UK96 956 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 SLC27A6Q9Y2P4 619 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 TRIOO75962 3097 aa16.79■□□□□ 0.28
CD28-203ENST00000458610 IGLV3-25P01717 112 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 RNASE9P60153 205 aaKnown RBP16.78■□□□□ 0.28
CD28-203ENST00000458610 SATB1Q01826 763 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 C2orf27AQ580R0 203 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 EOGTQ5NDL2 527 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 C10orf76Q5T2E6 689 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 IRF2BP2Q7Z5L9 587 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 UCMAQ8WVF2 138 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 BAP1Q92560 729 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 BHMTQ93088 406 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 PLK2Q9NYY3 685 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 ADAM22Q9P0K1 906 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 IFNKQ9P0W0 207 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 STARD13Q9Y3M8 1113 aa16.78■□□□□ 0.28
CD28-203ENST00000458610 A0A1W2PQJ5 194 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 LRRC53A6NM62 1247 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 PROB1E7EW31 1015 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 GOLGA8SH3BPF8 625 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 M0QYT0 321 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 TIMM44O43615 452 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 TSPAN3O60637 253 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 CISD3P0C7P0 127 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 UNGP13051 313 aaPredicted RBP16.77■□□□□ 0.28
CD28-203ENST00000458610 CNR2P34972 360 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 SEC13P55735 322 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 CENPCQ03188 943 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 CLEC16AQ2KHT3 1053 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 ZC3H12AQ5D1E8 599 aaKnown RBP16.77■□□□□ 0.28
CD28-203ENST00000458610 ACBD5Q5T8D3 534 aaPredicted RBP16.77■□□□□ 0.28
CD28-203ENST00000458610 MMS22LQ6ZRQ5 1243 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 PHF13Q86YI8 300 aaPredicted RBP16.77■□□□□ 0.28
CD28-203ENST00000458610 PHTF2Q8N3S3 785 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 HJURPQ8NCD3 748 aaPredicted RBP16.77■□□□□ 0.28
CD28-203ENST00000458610 EZH1Q92800 747 aaPredicted RBP16.77■□□□□ 0.28
CD28-203ENST00000458610 NELL1Q92832 810 aa16.77■□□□□ 0.28
CD28-203ENST00000458610 PIWIL1Q96J94 861 aaKnown RBP16.77■□□□□ 0.28
CD28-203ENST00000458610 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.77■□□□□ 0.28
CD28-203ENST00000458610 BZW2Q9Y6E2 419 aaKnown RBP16.77■□□□□ 0.28
CD28-203ENST00000458610 CCDC163A0A0D9SF12 145 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 KCNU1A8MYU2 1149 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 NPC1O15118 1278 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 ZBTB24O43167 697 aaPredicted RBP16.76■□□□□ 0.27
CD28-203ENST00000458610 MOCS2O96007 188 aaPredicted RBP16.76■□□□□ 0.27
CD28-203ENST00000458610 KLHL30Q0D2K2 578 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 NME3Q13232 169 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 EIF4EBP2Q13542 120 aaPredicted RBP16.76■□□□□ 0.27
CD28-203ENST00000458610 DMC1Q14565 340 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 SLC25A52Q3SY17 297 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 PIK3R6Q5UE93 754 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 TSSK4Q6SA08 328 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 LONP2Q86WA8 852 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 ZBTB44Q8NCP5 570 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 SLC30A5Q8TAD4 765 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 SYN2Q92777 582 aaPredicted RBP16.76■□□□□ 0.27
CD28-203ENST00000458610 NKD2Q969F2 451 aaPredicted RBP16.76■□□□□ 0.27
CD28-203ENST00000458610 PCDHB18PQ96TA0 734 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 NPY6RQ99463 290 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 FAM86C1Q9NVL1 165 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 MMP17Q9ULZ9 603 aa16.76■□□□□ 0.27
CD28-203ENST00000458610 MUC6Q6W4X9 2439 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 SYNJ2BP-COX16A0A087WUM0 186 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 ANKRD62A6NC57 917 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 ALDH1A2O94788 518 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 DESP17661 470 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 TIE1P35590 1138 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 PBX1P40424 430 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 PRKCIP41743 596 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 KIR2DL1P43626 348 aaPredicted RBP16.75■□□□□ 0.27
CD28-203ENST00000458610 SULT1E1P49888 294 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 DGKEP52429 567 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 DEUP1Q05D60 604 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 C1QBPQ07021 282 aaKnown RBP16.75■□□□□ 0.27
CD28-203ENST00000458610 EIF4HQ15056 248 aaKnown RBP16.75■□□□□ 0.27
CD28-203ENST00000458610 BRMS1LQ5PSV4 323 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 ACAD10Q6JQN1 1059 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 ANKS1BQ7Z6G8 1248 aa16.75■□□□□ 0.27
CD28-203ENST00000458610 VPS36Q86VN1 386 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms