RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 PIK3R6Q5UE93 754 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 PPP1R2P3Q6NXS1 205 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 ARCQ7LC44 396 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 C12orf40Q86WS4 652 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 ADGRG2Q8IZP9 1017 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 CCDC185Q8N715 623 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 CENPIQ92674 756 aaPredicted RBP14.61□□□□□ -0.07
TIMP1-205ENST00000456754 RNF34Q969K3 372 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 TRIM11Q96F44 468 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 PDLIM2Q96JY6 352 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 EIF3CQ99613 913 aaKnown RBP14.61□□□□□ -0.07
TIMP1-205ENST00000456754 TRIM62Q9BVG3 475 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 EPHX3Q9H6B9 360 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 ECT2Q9H8V3 914 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 SLC2A4RGQ9NR83 387 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 THG1LQ9NWX6 298 aaKnown RBP14.61□□□□□ -0.07
TIMP1-205ENST00000456754 PLK2Q9NYY3 685 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 SALL4Q9UJQ4 1053 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 LSM7Q9UK45 103 aaKnown RBP14.61□□□□□ -0.07
TIMP1-205ENST00000456754 STAP1Q9ULZ2 295 aa14.61□□□□□ -0.07
TIMP1-205ENST00000456754 TMEM110-MUSTN1A8MSY1 372 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 GOLGA6L6A8MZA4 724 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 TRIM24O15164 1050 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 PAGE1O75459 146 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 ENDOD1O94919 500 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 TMEM253P0C7T8 217 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 RDXP35241 583 aaKnown RBP14.6□□□□□ -0.07
TIMP1-205ENST00000456754 CYLC1P35663 651 aaPredicted RBP14.6□□□□□ -0.07
TIMP1-205ENST00000456754 HARS2P49590 506 aaKnown RBP14.6□□□□□ -0.07
TIMP1-205ENST00000456754 RING1Q06587 406 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 RUNX3Q13761 415 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 DHCR24Q15392 516 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 ARTNQ5T4W7 220 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 RAP1GAP2Q684P5 730 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 TXNDC11Q6PKC3 985 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 C14orf80Q86SX3 495 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 SFTPA1Q8IWL2 248 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 CCDC170Q8IYT3 715 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 ZNF564Q8TBZ8 553 aaPredicted RBP14.6□□□□□ -0.07
TIMP1-205ENST00000456754 CTNNBL1Q8WYA6 563 aaPredicted RBP14.6□□□□□ -0.07
TIMP1-205ENST00000456754 PEBP4Q96S96 227 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 TKTL2Q9H0I9 626 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 KCNF1Q9H3M0 494 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 GPATCH2LQ9NWQ4 482 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 CTTNBP2NLQ9P2B4 639 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 TRIM10Q9UDY6 481 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 ANAPC7Q9UJX3 599 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 CLEC4EQ9ULY5 219 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 DUSP10Q9Y6W6 482 aa14.6□□□□□ -0.07
TIMP1-205ENST00000456754 ATG2BQ96BY7 2078 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 GFRA2O00451 464 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 DCXO43602 365 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 ACSL4O60488 711 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 GBP1P32455 592 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 SLC6A11P48066 632 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 NNTQ13423 1086 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 PDGFRLQ15198 375 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 SLC44A4Q53GD3 710 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 TXNRD3NBQ6F5E7 133 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 CIR1Q86X95 450 aaPredicted RBP14.59□□□□□ -0.07
TIMP1-205ENST00000456754 FAM217AQ8IXS0 508 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 SIX5Q8N196 739 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 CFAP52Q8N1V2 620 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 NAT16Q8N8M0 369 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 SLC35G2Q8TBE7 412 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 IRF7Q92985 503 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 PGAP3Q96FM1 320 aaPredicted RBP14.59□□□□□ -0.07
TIMP1-205ENST00000456754 PRICKLE1Q96MT3 831 aaPredicted RBP14.59□□□□□ -0.07
TIMP1-205ENST00000456754 CNPY3Q9BT09 278 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 LACRTQ9GZZ8 138 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 FBRSL1Q9HCM7 1045 aaKnown RBP14.59□□□□□ -0.07
TIMP1-205ENST00000456754 ARHGEF38Q9NXL2 777 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 FBXL21Q9UKT6 434 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 HYOU1Q9Y4L1 999 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 SCINQ9Y6U3 715 aa14.59□□□□□ -0.07
TIMP1-205ENST00000456754 KIAA1549LQ6ZVL6 1849 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 NEDD8-MDP1E9PL57 170 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 APOEP02649 317 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 CCR1P32246 355 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 GJA4P35212 333 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 NUMBP49757 651 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 KPNA1P52294 538 aaPredicted RBP14.58□□□□□ -0.08
TIMP1-205ENST00000456754 RPS24P62847 133 aaKnown RBP14.58□□□□□ -0.08
TIMP1-205ENST00000456754 PPP2R5DQ14738 602 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 SPA17Q15506 151 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 ANO4Q32M45 955 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 ITPRIPL2Q3MIP1 535 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 MS4A13Q5J8X5 152 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 NUGGCQ68CJ6 796 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 SCYL2Q6P3W7 929 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 TPRG1Q6ZUI0 275 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 CYP4V2Q6ZWL3 525 aaPredicted RBP14.58□□□□□ -0.08
TIMP1-205ENST00000456754 STRADAQ7RTN6 431 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 PYROXD2Q8N2H3 581 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 CSGALNACT1Q8TDX6 532 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 EDAQ92838 391 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 ATP2A3Q93084 1043 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 PRMT1Q99873 361 aaKnown RBP14.58□□□□□ -0.08
TIMP1-205ENST00000456754 DCLK3Q9C098 648 aa14.58□□□□□ -0.08
TIMP1-205ENST00000456754 SIK2Q9H0K1 926 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms