RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 CACNA1BQ00975 2339 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 KNL1Q8NG31 2342 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 A0A0A0MRY4 1105 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 A0A1B0GVL5 298 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ZNF840PA6NDX5 716 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 A8MXQ7 604 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 K7EQS6 105 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 SLC30A4O14863 429 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 KIAA0391O15091 583 aaKnown RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 EIF3DO15371 548 aaKnown RBP eCLIP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 EXOC3O60645 756 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ATG13O75143 517 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 TACC1O75410 805 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 KRT37O76014 449 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 BEST1O76090 585 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 CLSTN1O94985 981 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 PAPSS2O95340 614 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 WISP1O95388 367 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 YEATS4O95619 227 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 C4BPAP04003 597 aaKnown RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 HSP90AA1P07900 732 aaKnown RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ZSCAN22P10073 491 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 MBL2P11226 248 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 DRD1P21728 446 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ANXA13P27216 316 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 HOXA6P31267 233 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 OPRD1P41143 372 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 MAGEA11P43364 429 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ME1P48163 572 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 PGFP49763 221 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 DGKEP52429 567 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 RPS26P62854 115 aaKnown RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 AMPD2Q01433 879 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ZNF252P-AS1Q0IIN9 211 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 STK4Q13043 487 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 BIRC3Q13489 604 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 TRPC3Q13507 836 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 DMC1Q14565 340 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ZNF268Q14587 947 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 KCNB1Q14721 858 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 PSMD6Q15008 389 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 PDGFRLQ15198 375 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 KNOP1Q1ED39 458 aaKnown RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 GAB4Q2WGN9 574 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 AASDHQ4L235 1098 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 PPM1JQ5JR12 505 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 TDRD10Q5VZ19 366 aaKnown RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 RESP18Q5W5W9 173 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 TCEAL6Q6IPX3 200 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 SPOPLQ6IQ16 392 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 RHBDF2Q6PJF5 856 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 VSTM1Q6UX27 236 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 PAQR9Q6ZVX9 377 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 UNC13DQ70J99 1090 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 CACNA2D4Q7Z3S7 1137 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 FILIP1Q7Z7B0 1213 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ACOT1Q86TX2 421 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 C12orf40Q86WS4 652 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 TRIM42Q8IWZ5 723 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 FRMD1Q8N878 549 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 NAT16Q8N8M0 369 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 SCAMP5Q8TAC9 235 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 SPATA18Q8TC71 538 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 GPBAR1Q8TDU6 330 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 GAB3Q8WWW8 586 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 RLN3Q8WXF3 142 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 TCEAL3Q969E4 200 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 WBP2Q969T9 261 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 WDR89Q96FK6 387 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 PAGE5Q96GU1 130 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 FUBP3Q96I24 572 aaKnown RBP eCLIP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 SPATA17Q96L03 361 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 C8orf48Q96LL4 319 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 CGRRF1Q99675 332 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 MED10Q9BTT4 135 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 TPSD1Q9BZJ3 242 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 SDCBP2Q9H190 292 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 XYLT2Q9H1B5 865 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 CCDC86Q9H6F5 360 aaKnown RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 SMYD3Q9H7B4 428 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 KIF9Q9HAQ2 790 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 KIAA1586Q9HCI6 787 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 OSGEPQ9NPF4 335 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ENAMQ9NRM1 1142 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 TRPM5Q9NZQ8 1165 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ZMYM5Q9UJ78 669 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 ARHGAP26Q9UNA1 814 aa4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 MORC2Q9Y6X9 1032 aaPredicted RBP4.98□□□□□ -1.61
GTF3C3-208ENST00000455546 LOC100289279A0A1B0GTE1 492 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 PVALEFA0A1B0GWK0 134 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 LRRIQ3A6PVS8 624 aaPredicted RBP4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 TM4SF5O14894 197 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 TRIM24O15164 1050 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 COCHO43405 550 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 KLRC4O43908 158 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 VNN1O95497 513 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 DLGAP3O95886 979 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 TBX18O95935 607 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 CYP17A1P05093 508 aa4.97□□□□□ -1.61
GTF3C3-208ENST00000455546 ZNF806P0C7X5 589 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms