RNA–Protein interactions for RNA: ENST00000455263.6

TP53-206, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,580 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-206ENST00000455263 CTCFP49711 727 aaPredicted RBP12.76□□□□□ -0.37
TP53-206ENST00000455263 BASP1P80723 227 aaKnown RBP12.76□□□□□ -0.37
TP53-206ENST00000455263 PKN2Q16513 984 aaKnown RBP12.76□□□□□ -0.37
TP53-206ENST00000455263 USP41Q3LFD5 358 aa12.76□□□□□ -0.37
TP53-206ENST00000455263 NCBP2-AS2Q69YL0 99 aa12.76□□□□□ -0.37
TP53-206ENST00000455263 MFSD5Q6N075 450 aa12.76□□□□□ -0.37
TP53-206ENST00000455263 DENND5BQ6ZUT9 1274 aa12.76□□□□□ -0.37
TP53-206ENST00000455263 C16orf59Q7L2K0 433 aa12.76□□□□□ -0.37
TP53-206ENST00000455263 MIB1Q86YT6 1006 aa12.76□□□□□ -0.37
TP53-206ENST00000455263 MREGQ8N565 214 aa12.76□□□□□ -0.37
TP53-206ENST00000455263 TMEM175Q9BSA9 504 aa12.76□□□□□ -0.37
TP53-206ENST00000455263 PNPLA8Q9NP80 782 aa12.76□□□□□ -0.37
TP53-206ENST00000455263 DTLQ9NZJ0 730 aa12.76□□□□□ -0.37
TP53-206ENST00000455263 BCCIPQ9P287 314 aaKnown RBP eCLIP12.76□□□□□ -0.37
TP53-206ENST00000455263 NLRC5Q86WI3 1866 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 TCRBV7S3A2A0A539 114 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 EEF2KO00418 725 aaKnown RBP12.75□□□□□ -0.37
TP53-206ENST00000455263 NUMBP49757 651 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 TAF10Q12962 218 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 PSMD5Q16401 504 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 KYNUQ16719 465 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 ANKRD22Q5VYY1 191 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 ALS2CLQ60I27 953 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 VSTM1Q6UX27 236 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 CAPN12Q6ZSI9 719 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 SH2D3CQ8N5H7 860 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 ANKLE1Q8NAG6 615 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 CCDC110Q8TBZ0 833 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 FUBP3Q96I24 572 aaKnown RBP eCLIP12.75□□□□□ -0.37
TP53-206ENST00000455263 C9orf72Q96LT7 481 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 TXLNGYQ9BZA5 131 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 EPB41L4BQ9H329 900 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 ABCC13Q9NSE7 274 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 TLDC2A0PJX2 215 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 TBC1D4O60343 1298 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 SPATA31D3P0C874 917 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 SYN1P17600 705 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 ELAVL2Q12926 359 aaKnown RBP12.75□□□□□ -0.37
TP53-206ENST00000455263 RHBDF2Q6PJF5 856 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 SPATA31D4Q6ZUB0 917 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 TMEM199Q8N511 208 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 CCNYQ8ND76 341 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 IRGQQ8WZA9 623 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 FAF2Q96CS3 445 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 TMEM169Q96HH4 297 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 TSPYL1Q9H0U9 437 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 USP29Q9HBJ7 922 aa12.75□□□□□ -0.37
TP53-206ENST00000455263 CXXC1Q9P0U4 656 aaPredicted RBP12.75□□□□□ -0.37
TP53-206ENST00000455263 TPX2Q9ULW0 747 aaKnown RBP12.75□□□□□ -0.37
TP53-206ENST00000455263 PTPRDP23468 1912 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 H0YGN5 161 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 MFSD11O43934 449 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 HMBSP08397 361 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 EPHB2P29323 1055 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 IFFO1Q0D2I5 559 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 RASIP1Q5U651 963 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 RWDD4Q6NW29 188 aaKnown RBP12.74□□□□□ -0.37
TP53-206ENST00000455263 RFX8Q6ZV50 586 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 BADQ92934 168 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 FBXO32Q969P5 355 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 CLSTN3Q9BQT9 956 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 PABPC3Q9H361 631 aaKnown RBP12.74□□□□□ -0.37
TP53-206ENST00000455263 PCDH9Q9HC56 1237 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 NFS1Q9Y697 457 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 TANC1Q9C0D5 1861 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 DNALI1O14645 258 aaPredicted RBP12.74□□□□□ -0.37
TP53-206ENST00000455263 ERCC2P18074 760 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 TGM2P21980 687 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 YWHAQP27348 245 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 SLCO1A2P46721 670 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 CXCR3P49682 368 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 TPI1P60174 286 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 EFEMP1Q12805 493 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 FASTKD3Q14CZ7 662 aaKnown RBP12.74□□□□□ -0.37
TP53-206ENST00000455263 ARL13BQ3SXY8 428 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 TTMPQ5BVD1 217 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 HIBCHQ6NVY1 386 aaPredicted RBP12.74□□□□□ -0.37
TP53-206ENST00000455263 MON1AQ86VX9 555 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 FAM71BQ8TC56 605 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 ZNF689Q96CS4 500 aaPredicted RBP12.74□□□□□ -0.37
TP53-206ENST00000455263 C8orf48Q96LL4 319 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 RBM15Q96T37 977 aaKnown RBP eCLIP12.74□□□□□ -0.37
TP53-206ENST00000455263 CDC42EP4Q9H3Q1 356 aaKnown RBP12.74□□□□□ -0.37
TP53-206ENST00000455263 SEPT10Q9P0V9 454 aa12.74□□□□□ -0.37
TP53-206ENST00000455263 H7C4K7 107 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 KIAA0355O15063 1070 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 LRIG2O94898 1065 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 F9P00740 461 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 ATF6P18850 670 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 GBP1P32455 592 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 ZNF844Q08AG5 666 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 AP1B1Q10567 949 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.73□□□□□ -0.37
TP53-206ENST00000455263 DEPDC1BQ8WUY9 529 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 EXOC4Q96A65 974 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 ZNF558Q96NG5 402 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 MED4Q9NPJ6 270 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 SCML2Q9UQR0 700 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 H3BRJ5 948 aa12.73□□□□□ -0.37
TP53-206ENST00000455263 PIAS1O75925 651 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms