RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CBX2Q14781 532 aaPredicted RBP17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 RPS6KA1Q15418 735 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 ARL13BQ3SXY8 428 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 ERMARDQ5T6L9 678 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 UNC45BQ8IWX7 931 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 USP13Q92995 863 aaPredicted RBP17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 RNF34Q969K3 372 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 SNRNP25Q9BV90 132 aaKnown RBP17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 ZWILCHQ9H900 591 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 TDP1Q9NUW8 608 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 SMPD4Q9NXE4 827 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 CDH7Q9ULB5 785 aa17.22■□□□□ 0.35
CCDC90B-202ENST00000455220 GRXCR2A6NFK2 248 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 ENC1O14682 589 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 PRAMEF12O95522 483 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 HMBSP08397 361 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 SMAD4Q13485 552 aaKnown RBP17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 SKIV2LQ15477 1246 aaKnown RBP17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 SMTNL2Q2TAL5 461 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 ATP13A4Q4VNC1 1196 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 KCNT1Q5JUK3 1230 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 SYT10Q6XYQ8 523 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 DDX42Q86XP3 938 aaKnown RBP eCLIP17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 ARID3BQ8IVW6 561 aaPredicted RBP17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 KATNAL2Q8IYT4 538 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 UBL4BQ8N7F7 174 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 ZSCAN18Q8TBC5 510 aaPredicted RBP17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 ALG3Q92685 438 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 AZIN2Q96A70 460 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 BTN2A3PQ96KV6 586 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 HAPLN3Q96S86 360 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 DDX56Q9NY93 547 aaKnown RBP17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 DNAI1Q9UI46 699 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 AP4E1Q9UPM8 1137 aa17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.21■□□□□ 0.35
CCDC90B-202ENST00000455220 LEFTY2O00292 366 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 LATS1O95835 1130 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 ATP1A1P05023 1023 aaKnown RBP17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 TNNT1P13805 278 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 ARSEP51690 589 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 USP4Q13107 963 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 DPYSL2Q16555 572 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 EFHC2Q5JST6 749 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 ATP6V0D2Q8N8Y2 350 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 FAM71BQ8TC56 605 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 PPM1EQ8WY54 764 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 HLA-CQ95604 372 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 WBP2Q969T9 261 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 ASB16Q96NS5 453 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 NAPGQ99747 312 aaPredicted RBP17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 SMG9Q9H0W8 520 aaKnown RBP17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 KIF9Q9HAQ2 790 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 TRPV4Q9HBA0 871 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 TMPRSS4Q9NRS4 437 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 CCL26Q9Y258 94 aa17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 ZFP37Q9Y6Q3 630 aaPredicted RBP17.2■□□□□ 0.34
CCDC90B-202ENST00000455220 CTAGE9A4FU28 777 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 MBTPS2O43462 519 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 PAGE1O75459 146 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 KLKB1P03952 638 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 CORO1AP31146 461 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 GJC1P36383 396 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 HARS2P49590 506 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 RWDD2BP57060 319 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 ZNF77Q15935 545 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 CA9Q16790 459 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 ACBD5Q5T8D3 534 aaPredicted RBP17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 PAPD7Q5XG87 772 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 Q6ZNB5 142 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 HTR3DQ70Z44 454 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 SH3RF2Q8TEC5 729 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 SMARCD2Q92925 531 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 C1orf74Q96LT6 269 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 MYADMQ96S97 322 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 DCLK3Q9C098 648 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 OSBPL2Q9H1P3 480 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 GPATCH2LQ9NWQ4 482 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 SLC12A6Q9UHW9 1150 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 XPO7Q9UIA9 1087 aaKnown RBP17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 STOML2Q9UJZ1 356 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 MOCS2O96007 188 aaPredicted RBP17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 IRF1P10914 325 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 NRG1Q02297 640 aaPredicted RBP17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 SEMA3BQ13214 749 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 FAM78AQ5JUQ0 283 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 PIK3R6Q5UE93 754 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 DCAF12L1Q5VU92 463 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 KIAA1958Q8N8K9 716 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 EXD1Q8NHP7 514 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 RIN3Q8TB24 985 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 HSPH1Q92598 858 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 ACSF2Q96CM8 615 aaPredicted RBP17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 OBP2AQ9NY56 170 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 CFAP97Q9P2B7 532 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 HS3ST4Q9Y661 456 aa17.19■□□□□ 0.34
CCDC90B-202ENST00000455220 E2F8A0AVK6 867 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 C3orf70A6NLC5 250 aaPredicted RBP17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 ACSL4O60488 711 aa17.18■□□□□ 0.34
CCDC90B-202ENST00000455220 FCARP24071 287 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms