RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 BTN2A3PQ96KV6 586 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 ZSWIM3Q96MP5 696 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 ASB16Q96NS5 453 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 APOL5Q9BWW9 433 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 TKTL2Q9H0I9 626 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 POMKQ9H5K3 350 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 ANLNQ9NQW6 1124 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 TDP1Q9NUW8 608 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 DDX56Q9NY93 547 aaKnown RBP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 EPS15L1Q9UBC2 864 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 FZD10Q9ULW2 581 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 ZNF510Q9Y2H8 683 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 CPQQ9Y646 472 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 KIF26AQ9ULI4 1882 aaPredicted RBP11.68□□□□□ -0.54
TRAF4-206ENST00000454852 BRWD1Q9NSI6 2320 aa11.68□□□□□ -0.54
TRAF4-206ENST00000454852 DOCK8Q8NF50 2099 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 REV3LO60673 3130 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 SPTBN5Q9NRC6 3674 aaKnown RBP11.67□□□□□ -0.54
TRAF4-206ENST00000454852 E2F8A0AVK6 867 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 GRXCR2A6NFK2 248 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 TMEM110-MUSTN1A8MSY1 372 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 GFRA2O00451 464 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 CES2O00748 559 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 FANCGO15287 622 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 FTCDO95954 541 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 KLKB1P03952 638 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 KCNA5P22460 613 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 L1CAMP32004 1257 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 HCAR3P49019 387 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 HARS2P49590 506 aaKnown RBP11.67□□□□□ -0.54
TRAF4-206ENST00000454852 KCNQ1P51787 676 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 MLLT6P55198 1093 aaPredicted RBP11.67□□□□□ -0.54
TRAF4-206ENST00000454852 PDK2Q15119 407 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 RPS6KA1Q15418 735 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 SMAD2Q15796 467 aaKnown RBP11.67□□□□□ -0.54
TRAF4-206ENST00000454852 ZNF77Q15935 545 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 C5orf22Q49AR2 442 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 ARTNQ5T4W7 220 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 DAB2IPQ5VWQ8 1189 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 PAPD7Q5XG87 772 aaKnown RBP11.67□□□□□ -0.54
TRAF4-206ENST00000454852 TXNRD3NBQ6F5E7 133 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 ARID3BQ8IVW6 561 aaPredicted RBP11.67□□□□□ -0.54
TRAF4-206ENST00000454852 CELF5Q8N6W0 485 aaKnown RBP11.67□□□□□ -0.54
TRAF4-206ENST00000454852 UBL4BQ8N7F7 174 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 ATP6V0D2Q8N8Y2 350 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 EXD1Q8NHP7 514 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 ZSCAN18Q8TBC5 510 aaPredicted RBP11.67□□□□□ -0.54
TRAF4-206ENST00000454852 TSC1Q92574 1164 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 KRT35Q92764 455 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 WDR24Q96S15 920 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 SNRNP25Q9BV90 132 aaKnown RBP11.67□□□□□ -0.54
TRAF4-206ENST00000454852 CARD9Q9H257 536 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 RETREG1Q9H6L5 497 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 RCOR3Q9P2K3 495 aaPredicted RBP11.67□□□□□ -0.54
TRAF4-206ENST00000454852 SLC12A6Q9UHW9 1150 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 CDH22Q9UJ99 828 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 HYOU1Q9Y4L1 999 aa11.67□□□□□ -0.54
TRAF4-206ENST00000454852 H3BQ06 376 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-206ENST00000454852 LEFTY2O00292 366 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 ACSL4O60488 711 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 PAGE1O75459 146 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 PRAMEF12O95522 483 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 LAMP2P13473 410 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 FCARP24071 287 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 HOXC13P31276 330 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 PTPN7P35236 360 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 RWDD2BP57060 319 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 COPS2P61201 443 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 CCDC85BQ15834 202 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-206ENST00000454852 EFHC2Q5JST6 749 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 FAM78AQ5JUQ0 283 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 MANEALQ5VSG8 457 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 SCYL2Q6P3W7 929 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 GET4Q7L5D6 327 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-206ENST00000454852 OTOP3Q7RTS5 596 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 ZNF683Q8IZ20 524 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 RCOR2Q8IZ40 523 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 CPXM2Q8N436 756 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 ING5Q8WYH8 240 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 ALG3Q92685 438 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 FAF2Q96CS3 445 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 OTUB2Q96DC9 234 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 MYADMQ96S97 322 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 NAPGQ99747 312 aaPredicted RBP11.66□□□□□ -0.54
TRAF4-206ENST00000454852 PRMT1Q99873 361 aaKnown RBP11.66□□□□□ -0.54
TRAF4-206ENST00000454852 PRDM16Q9HAZ2 1276 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 GKN1Q9NS71 199 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 PCSK1NQ9UHG2 260 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 LSM7Q9UK45 103 aaKnown RBP11.66□□□□□ -0.54
TRAF4-206ENST00000454852 AP4E1Q9UPM8 1137 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 EFR3BQ9Y2G0 817 aa11.66□□□□□ -0.54
TRAF4-206ENST00000454852 IGLV3-10A0A075B6K4 115 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 SYNJ2BP-COX16A0A087WUM0 186 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 CTAGE9A4FU28 777 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 C3orf70A6NLC5 250 aaPredicted RBP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 ECI2O75521 394 aa11.65□□□□□ -0.54
TRAF4-206ENST00000454852 ZRANB2O95218 330 aaKnown RBP eCLIP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 ATP1A1P05023 1023 aaKnown RBP11.65□□□□□ -0.54
TRAF4-206ENST00000454852 KDELR1P24390 212 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms