RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CDK17Q00537 523 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 SATB1Q01826 763 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 ARID5AQ03989 594 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 KDSRQ06136 332 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 ASIC2Q16515 512 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 ADGRF1Q5T601 910 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 HGSNATQ68CP4 663 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 SFTPA1Q8IWL2 248 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 USP33Q8TEY7 942 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 SYN2Q92777 582 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-205ENST00000454542 PRICKLE1Q96MT3 831 aaPredicted RBP14.73□□□□□ -0.05
HDAC4-205ENST00000454542 XPO6Q96QU8 1125 aaKnown RBP14.73□□□□□ -0.05
HDAC4-205ENST00000454542 C11orf70Q9BRQ4 267 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 ARHGEF4Q9NR80 690 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 DNAJC17Q9NVM6 304 aaKnown RBP14.73□□□□□ -0.05
HDAC4-205ENST00000454542 C2orf42Q9NWW7 574 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 DEC1Q9P2X7 70 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 SLC27A6Q9Y2P4 619 aa14.73□□□□□ -0.05
HDAC4-205ENST00000454542 KCNU1A8MYU2 1149 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 H0Y858 1186 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 K7ESF4 209 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 TRIM24O15164 1050 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 CALB1P05937 261 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 SP9P0CG40 484 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 SLC6A4P31645 630 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 NBL1P41271 181 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 TNFRSF4P43489 277 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 NSFP46459 744 aaKnown RBP14.72□□□□□ -0.05
HDAC4-205ENST00000454542 SGSHP51688 502 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 C1QBPQ07021 282 aaKnown RBP14.72□□□□□ -0.05
HDAC4-205ENST00000454542 PPP2R5DQ14738 602 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 PREPLQ4J6C6 727 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-205ENST00000454542 MPP7Q5T2T1 576 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 SFMBT2Q5VUG0 894 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 GRAMD4Q6IC98 578 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 SARM1Q6SZW1 724 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 ZNF571Q7Z3V5 609 aaPredicted RBP14.72□□□□□ -0.05
HDAC4-205ENST00000454542 NAT16Q8N8M0 369 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 RNF214Q8ND24 703 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 C3orf20Q8ND61 904 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 CCDC26Q8TAB7 109 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 SLC30A5Q8TAD4 765 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 PRMT1Q99873 361 aaKnown RBP14.72□□□□□ -0.05
HDAC4-205ENST00000454542 NUCKS1Q9H1E3 243 aaKnown RBP14.72□□□□□ -0.05
HDAC4-205ENST00000454542 FAM204AQ9H8W3 233 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 METTL5Q9NRN9 209 aaKnown RBP14.72□□□□□ -0.05
HDAC4-205ENST00000454542 DDIT4Q9NX09 232 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.72□□□□□ -0.05
HDAC4-205ENST00000454542 HCN2Q9UL51 889 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 STAP1Q9ULZ2 295 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 CAPN11Q9UMQ6 739 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 STARD13Q9Y3M8 1113 aa14.72□□□□□ -0.05
HDAC4-205ENST00000454542 ANTXRLA6NF34 631 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 CBFA2T2O43439 604 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 APOEP02649 317 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 CYBBP04839 570 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 TPM3P06753 285 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 TFE3P19532 575 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-205ENST00000454542 HOXA6P31267 233 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 SLC11A2P49281 568 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 MRPS21P82921 87 aaKnown RBP14.71□□□□□ -0.05
HDAC4-205ENST00000454542 ZBED6P86452 979 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 ARID5BQ14865 1188 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 SLC25A52Q3SY17 297 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 HSF5Q4G112 596 aaPredicted RBP14.71□□□□□ -0.05
HDAC4-205ENST00000454542 MPPE1Q53F39 396 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 ZC3H12AQ5D1E8 599 aaKnown RBP14.71□□□□□ -0.05
HDAC4-205ENST00000454542 PIK3R6Q5UE93 754 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 PPP1R2P3Q6NXS1 205 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 DDX51Q8N8A6 666 aaKnown RBP eCLIP14.71□□□□□ -0.05
HDAC4-205ENST00000454542 ZBTB44Q8NCP5 570 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 RPLP0P6Q8NHW5 317 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 ACDQ96AP0 544 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 MYEOVQ96EZ4 313 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 BTN2A3PQ96KV6 586 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 SLC2A11Q9BYW1 496 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 HAUS4Q9H6D7 363 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 PIGVQ9NUD9 493 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 TMEM51Q9NW97 253 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.71□□□□□ -0.05
HDAC4-205ENST00000454542 PLK2Q9NYY3 685 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 ADAM22Q9P0K1 906 aa14.71□□□□□ -0.05
HDAC4-205ENST00000454542 XPO7Q9UIA9 1087 aaKnown RBP14.71□□□□□ -0.05
HDAC4-205ENST00000454542 FAM170AA1A519 330 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 C2CD4BA6NLJ0 364 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 PROB1E7EW31 1015 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 GOLGA8SH3BPF8 625 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 ATG13O75143 517 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 ENDOD1O94919 500 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 SLC2A3P11169 496 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 HNRNPH3P31942 346 aaKnown RBP14.7□□□□□ -0.06
HDAC4-205ENST00000454542 CCR1P32246 355 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 GBP1P32455 592 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 PLA2G5P39877 138 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 CXCL12P48061 93 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 DGKGP49619 791 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 CXCR3P49682 368 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 SULT1E1P49888 294 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 MTA1Q13330 715 aa14.7□□□□□ -0.06
HDAC4-205ENST00000454542 MS4A13Q5J8X5 152 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms