RNA–Protein interactions for RNA: ENST00000454498.6

CSGALNACT1-203, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 4,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-203ENST00000454498 SHCBP1LQ9BZQ2 653 aa10.33□□□□□ -0.76
CSGALNACT1-203ENST00000454498 BRD8Q9H0E9 1235 aa10.33□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MARCH2Q9P0N8 246 aa10.33□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TRHDEQ9UKU6 1024 aa10.33□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CDH9Q9ULB4 789 aa10.33□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DRG1Q9Y295 367 aaKnown RBP10.33□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PCDHB12Q9Y5F1 795 aa10.33□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DUOX1Q9NRD9 1551 aa10.33□□□□□ -0.76
CSGALNACT1-203ENST00000454498 LRP6O75581 1613 aa10.33□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ZNF142P52746 1687 aaPredicted RBP10.33□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SMIM28A0A1B0GU29 152 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 LIASO43766 372 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MGAT1P26572 445 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 GP5P40197 560 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TUFMP49411 452 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 RHOAP61586 193 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MMRN1Q13201 1228 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TEDDM1Q5T9Z0 273 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 JOSD2Q8TAC2 188 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 FOPNLQ96NB1 174 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 APOL5Q9BWW9 433 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 GOLGA2P5Q9HBQ8 144 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ENTPD7Q9NQZ7 604 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SLC13A4Q9UKG4 626 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SETD1AO15047 1707 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TMEM247A6NEH6 219 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CSE1LP55060 971 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SYTL3Q4VX76 610 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 NPNTQ6UXI9 565 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PRUNE1Q86TP1 453 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 LONP2Q86WA8 852 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 IFNEQ86WN2 208 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 HS6ST3Q8IZP7 471 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 KCNK16Q96T55 309 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MRPL1Q9BYD6 325 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SENP6Q9GZR1 1112 aaPredicted RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TRMT6Q9UJA5 497 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PCDHGB4Q9UN71 923 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 HACD1B0YJ81 288 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DHX15O43143 795 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 RTN3O95197 1032 aaPredicted RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ADSSP30520 456 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 RPL22P35268 128 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ZNF135P52742 658 aaPredicted RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 HDAC4P56524 1084 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PKN2Q16513 984 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SLC45A4Q5BKX6 768 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ZC3H12AQ5D1E8 599 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DUPD1Q68J44 220 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CES3Q6UWW8 571 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PRPF39Q86UA1 669 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 C7orf43Q8WVR3 580 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 N4BP2L2Q92802 583 aaPredicted RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ZFP42Q96MM3 310 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CPXM1Q96SM3 734 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 VAT1Q99536 393 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ABCC13Q9NSE7 274 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PKD2L2Q9NZM6 624 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CDYLQ9Y232 598 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 IPPQ9Y573 584 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ZNF536O15090 1300 aa10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PRRC2BQ5JSZ5 2229 aaKnown RBP10.32□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MAGEB16A2A368 324 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CLDN5O00501 218 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SRP72O76094 671 aaKnown RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 LCA5LO95447 670 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ELNP15502 786 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 RPL9P32969 192 aaKnown RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 GTF2H3Q13889 308 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 KCTD19Q17RG1 926 aaPredicted RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 NOMO2Q5JPE7 1267 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 RETSATQ6NUM9 610 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TCP10LQ8TDR4 215 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 FAM167BQ9BTA0 163 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PRDM12Q9H4Q4 367 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 NRDE2Q9H7Z3 1164 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TBC1D13Q9NVG8 400 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 hCG_1818297A0A087WSY0 165 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 WDR27A2RRH5 827 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 IGF2BP3O00425 579 aaKnown RBP eCLIP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SKAP2O75563 359 aaPredicted RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SOAT2O75908 522 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CPA3P15088 417 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 SH3BGRP55822 239 aaPredicted RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ABCE1P61221 599 aaKnown RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MTFR1Q15390 333 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TTLL9Q3SXZ7 439 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 PTAR1Q7Z6K3 402 aaPredicted RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 NSL1Q96IY1 281 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MRPL45Q9BRJ2 306 aaKnown RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 CYP4F12Q9HCS2 524 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ATP13A1Q9HD20 1204 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 MRGBPQ9NV56 204 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TUBGCP4Q9UGJ1 667 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 RUVBL2Q9Y230 463 aaKnown RBP10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 GIT1Q9Y2X7 761 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 ADGRA2Q96PE1 1338 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TTLL13PA6NNM8 815 aa10.31□□□□□ -0.76
CSGALNACT1-203ENST00000454498 TM9SF1O15321 606 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms