RNA–Protein interactions for RNA: ENST00000454181.6

LYSMD2-202, Transcript of LysM domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LYSMD2, Length 1,228 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-202ENST00000454181 FAM124AQ86V42 546 aa24.83■■□□□ 1.57
LYSMD2-202ENST00000454181 SLC4A11Q8NBS3 891 aa24.83■■□□□ 1.57
LYSMD2-202ENST00000454181 RNF139Q8WU17 664 aa24.83■■□□□ 1.57
LYSMD2-202ENST00000454181 SORCS1Q8WY21 1168 aa24.83■■□□□ 1.57
LYSMD2-202ENST00000454181 ARID3AQ99856 593 aa24.83■■□□□ 1.57
LYSMD2-202ENST00000454181 LRRC4Q9HBW1 653 aa24.83■■□□□ 1.57
LYSMD2-202ENST00000454181 OLA1Q9NTK5 396 aaKnown RBP24.83■■□□□ 1.57
LYSMD2-202ENST00000454181 EIF2B4Q9UI10 523 aaKnown RBP24.83■■□□□ 1.57
LYSMD2-202ENST00000454181 PRR29P0C7W0 189 aa24.82■■□□□ 1.56
LYSMD2-202ENST00000454181 PRKCHP24723 683 aa24.82■■□□□ 1.56
LYSMD2-202ENST00000454181 KRT85P78386 507 aa24.82■■□□□ 1.56
LYSMD2-202ENST00000454181 RAB41Q5JT25 222 aa24.82■■□□□ 1.56
LYSMD2-202ENST00000454181 SNX19Q92543 992 aa24.82■■□□□ 1.56
LYSMD2-202ENST00000454181 SEMA4DQ92854 862 aa24.82■■□□□ 1.56
LYSMD2-202ENST00000454181 IPO9Q96P70 1041 aaKnown RBP24.82■■□□□ 1.56
LYSMD2-202ENST00000454181 HESX1Q9UBX0 185 aa24.82■■□□□ 1.56
LYSMD2-202ENST00000454181 CLEC4EQ9ULY5 219 aa24.82■■□□□ 1.56
LYSMD2-202ENST00000454181 TSPAN3O60637 253 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 IGLV3-19P01714 112 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 EPB41P11171 864 aaKnown RBP24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 NDUFA8P51970 172 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 COPAP53621 1224 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 ZNF445P59923 1031 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 SCAPQ12770 1279 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 DPYDQ12882 1025 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 COL9A2Q14055 689 aaPredicted RBP24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 FNDC3BQ53EP0 1204 aaKnown RBP24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 PROSER1Q86XN7 944 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 FMNL3Q8IVF7 1028 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 OR2T3Q8NH03 318 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 CCDC34Q96HJ3 373 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 ULBP1Q9BZM6 244 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 PCED1AQ9H1Q7 454 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 TM7SF3Q9NS93 570 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 PCOLCE2Q9UKZ9 415 aa24.81■■□□□ 1.56
LYSMD2-202ENST00000454181 CETN3O15182 167 aa24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 ZNF883P0CG24 379 aa24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 SUZ12Q15022 739 aaKnown RBP24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 TRIP4Q15650 581 aaPredicted RBP24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 GOLGA7BQ2TAP0 167 aa24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 HLA-BQ31612 363 aa24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 EDRF1Q3B7T1 1238 aa24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 PM20D1Q6GTS8 502 aa24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 WFIKKN2Q8TEU8 576 aa24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 LHX5Q9H2C1 402 aa24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 IL21RQ9HBE5 538 aa24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 HBS1LQ9Y450 684 aaKnown RBP24.8■■□□□ 1.56
LYSMD2-202ENST00000454181 HLA-EP13747 358 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 BCAT1P54687 386 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 TEAD4Q15561 434 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 SGO2Q562F6 1265 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 TMEM215Q68D42 235 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 KRBA2Q6ZNG9 492 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 GLRX5Q86SX6 157 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 FAM217AQ8IXS0 508 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 SIX6OS1Q8N1H7 587 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 RHBDD1Q8TEB9 315 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 NDRG1Q92597 394 aaKnown RBP24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 TATDN2Q93075 761 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 TMA16Q96EY4 203 aaKnown RBP24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 EEF2KMTQ96G04 330 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 CDC6Q99741 560 aa24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 CCDC86Q9H6F5 360 aaKnown RBP24.79■■□□□ 1.56
LYSMD2-202ENST00000454181 XPO1O14980 1071 aaKnown RBP24.78■■□□□ 1.56
LYSMD2-202ENST00000454181 CD19P15391 556 aa24.78■■□□□ 1.56
LYSMD2-202ENST00000454181 AFF3P51826 1226 aaKnown RBP24.78■■□□□ 1.56
LYSMD2-202ENST00000454181 YWHAEP62258 255 aaKnown RBP24.78■■□□□ 1.56
LYSMD2-202ENST00000454181 PDE4CQ08493 712 aa24.78■■□□□ 1.56
LYSMD2-202ENST00000454181 TCERG1LQ5VWI1 586 aa24.78■■□□□ 1.56
LYSMD2-202ENST00000454181 CCNI2Q6ZMN8 369 aaPredicted RBP24.78■■□□□ 1.56
LYSMD2-202ENST00000454181 TSPAN16Q9UKR8 245 aa24.78■■□□□ 1.56
LYSMD2-202ENST00000454181 A0A1B0GVT2 93 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 TAF4O00268 1085 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 FLRT2O43155 660 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 CBFA2T3O75081 653 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 HOXB3P14651 431 aaPredicted RBP24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 HOXD9P28356 352 aaPredicted RBP24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 ADIGQ0VDE8 80 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 BST2Q10589 180 aaKnown RBP24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 CAMK2GQ13555 558 aaPredicted RBP24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 ZCWPW2Q504Y3 356 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 ADGRF1Q5T601 910 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 BSPRYQ5W0U4 402 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 CHST9Q7L1S5 443 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 SLCO6A1Q86UG4 719 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 RBBP8NLQ8NC74 664 aaPredicted RBP24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 CYB5D2Q8WUJ1 264 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 EDEM1Q92611 657 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 KIAA1522Q9P206 1035 aaPredicted RBP24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 SFMBT1Q9UHJ3 866 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 FNDC3AQ9Y2H6 1198 aaKnown RBP24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 PCDHGB2Q9Y5G2 931 aa24.77■■□□□ 1.56
LYSMD2-202ENST00000454181 SPEGQ15772 3267 aa24.76■■□□□ 1.55
LYSMD2-202ENST00000454181 FAM237AA0A1B0GTK4 181 aa24.76■■□□□ 1.55
LYSMD2-202ENST00000454181 ATP5BP06576 529 aaKnown RBP24.76■■□□□ 1.55
LYSMD2-202ENST00000454181 HLA-FP30511 346 aa24.76■■□□□ 1.55
LYSMD2-202ENST00000454181 CSNK1EP49674 416 aaKnown RBP24.76■■□□□ 1.55
LYSMD2-202ENST00000454181 DCAF17Q5H9S7 520 aaPredicted RBP24.76■■□□□ 1.55
LYSMD2-202ENST00000454181 AHI1Q8N157 1196 aa24.76■■□□□ 1.55
LYSMD2-202ENST00000454181 BTBD1Q9H0C5 482 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms