RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 SLC30A4O14863 429 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 CACNG3O60359 315 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 HNRNPLP14866 589 aaKnown RBP eCLIP18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 HNRNPH3P31942 346 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 CHKAP35790 457 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 DGKGP49619 791 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 GCNT1Q02742 428 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 TSR1Q2NL82 804 aaKnown RBP18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 SMYD5Q6GMV2 418 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 SDE2Q6IQ49 451 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 Q6ZNB5 142 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 ENOSF1Q7L5Y1 443 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 SIX6OS1Q8N1H7 587 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 UBA3Q8TBC4 463 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 SYN2Q92777 582 aaPredicted RBP18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 SPACA7Q96KW9 195 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 KCNF1Q9H3M0 494 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 VPS45Q9NRW7 570 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 PLK2Q9NYY3 685 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 MARCH2Q9P0N8 246 aa18.82■□□□□ 0.6
SQSTM1-204ENST00000453046 EML5Q05BV3 1969 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 LRRC53A6NM62 1247 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 RNF225M0QZC1 329 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 TULP2O00295 520 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 ZBTB24O43167 697 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 MAP3K13O43283 966 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 ADAM23O75077 832 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 PAEPP09466 180 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 SETSIPP0DME0 302 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 NTSR1P30989 418 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 CORO1AP31146 461 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 JAM2P57087 298 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 CCZ1BP86790 482 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 CCZ1P86791 482 aaPredicted RBP18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 APBA1Q02410 837 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 ADIGQ0VDE8 80 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 MEA1Q16626 185 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 IL31Q6EBC2 164 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 PM20D1Q6GTS8 502 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 RRAGAQ7L523 313 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 CHPFQ8IZ52 775 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 RNF139Q8WU17 664 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 RLN3Q8WXF3 142 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 SPAG5Q96R06 1193 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 STK33Q9BYT3 514 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 SMOC1Q9H4F8 434 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 NLRC4Q9NPP4 1024 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 OLA1Q9NTK5 396 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 ZNHIT6Q9NWK9 470 aaKnown RBP18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 DNAJC12Q9UKB3 198 aa18.81■□□□□ 0.6
SQSTM1-204ENST00000453046 O00370 1275 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 KLKB1P03952 638 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 CHRM1P11229 460 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 LCP1P13796 627 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 HOXB2P14652 356 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 WASP42768 502 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 DHPSP49366 369 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 BYSLQ13895 437 aaKnown RBP18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 RAPGEF1Q13905 1077 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 PLA2G2CQ5R387 149 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 PMS2CLQ68D20 193 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 TOGARAM2Q6ZUX3 1019 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 DENND1CQ8IV53 801 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 ARHGEF19Q8IW93 802 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 UBR7Q8N806 425 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 NDRG1Q92597 394 aaKnown RBP18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 BAG1Q99933 345 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 AJAP1Q9UKB5 411 aaPredicted RBP18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 STARD13Q9Y3M8 1113 aa18.8■□□□□ 0.6
SQSTM1-204ENST00000453046 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.8■□□□□ 0.63e-8■■■□□ 15.5
SQSTM1-204ENST00000453046 BCLAF3A2AJT9 711 aaKnown RBP18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 F8VZ95 297 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 CYBBP04839 570 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 BCKDHBP21953 392 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 MFAP3P55082 362 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 CDK17Q00537 523 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 EGFLAMQ63HQ2 1017 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 GJB7Q6PEY0 223 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 LCLAT1Q6UWP7 414 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 TMEM139Q8IV31 216 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 OLIG1Q8TAK6 271 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 KAT5Q92993 513 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 PLD4Q96BZ4 506 aa18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 UBE2TQ9NPD8 197 aaPredicted RBP18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 AGO1Q9UL18 857 aaKnown RBP18.79■□□□□ 0.6
SQSTM1-204ENST00000453046 MYO18AQ92614 2054 aaKnown RBP18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 PRRT4C9JH25 899 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 M0QYV0 167 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 ARHGAP6O43182 974 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 KCNA4P22459 653 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 P2RY2P41231 377 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 STAT1P42224 750 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 RGS7P49802 495 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 DRAP1Q14919 205 aaPredicted RBP18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 STILQ15468 1287 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 SFMBT2Q5VUG0 894 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 BSPRYQ5W0U4 402 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 TCEAL6Q6IPX3 200 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 LPCAT2Q7L5N7 544 aa18.78■□□□□ 0.6
SQSTM1-204ENST00000453046 CYP2U1Q7Z449 544 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms