RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 TRIP6Q15654 476 aaKnown RBP12.22□□□□□ -0.45
GARNL3-210ENST00000453030 ZNF423Q2M1K9 1284 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 DCAF17Q5H9S7 520 aaPredicted RBP12.22□□□□□ -0.45
GARNL3-210ENST00000453030 RAB41Q5JT25 222 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 DCAF12L1Q5VU92 463 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 TCERG1LQ5VWI1 586 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 TMEM215Q68D42 235 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 SERPINA13PQ6UXR4 307 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 KRBA2Q6ZNG9 492 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 RAB44Q7Z6P3 723 aaPredicted RBP12.22□□□□□ -0.45
GARNL3-210ENST00000453030 CPXM2Q8N436 756 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 ZNF276Q8N554 614 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 ZNF366Q8N895 744 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 PNPLA1Q8N8W4 532 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 FBXL13Q8NEE6 735 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 SNX19Q92543 992 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 PRCCQ92733 491 aaPredicted RBP12.22□□□□□ -0.45
GARNL3-210ENST00000453030 PLD4Q96BZ4 506 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 PIWIL1Q96J94 861 aaKnown RBP12.22□□□□□ -0.45
GARNL3-210ENST00000453030 GOLPH3LQ9H4A5 285 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 RAB20Q9NX57 234 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 ELOVL2Q9NXB9 296 aa12.22□□□□□ -0.45
GARNL3-210ENST00000453030 FASNP49327 2511 aaKnown RBP12.22□□□□□ -0.45
GARNL3-210ENST00000453030 SMG1Q96Q15 3661 aaKnown RBP12.21□□□□□ -0.45
GARNL3-210ENST00000453030 ZBED1O96006 694 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 ACADMP11310 421 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 HOXB3P14651 431 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-210ENST00000453030 HOXD9P28356 352 aaPredicted RBP12.21□□□□□ -0.45
GARNL3-210ENST00000453030 GTF2H1P32780 548 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 BCAT1P54687 386 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 ADIGQ0VDE8 80 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 SLC14A1Q13336 389 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 HNRNPDQ14103 355 aaKnown RBP12.21□□□□□ -0.45
GARNL3-210ENST00000453030 CBWD6Q4V339 395 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 FNDC3BQ53EP0 1204 aaKnown RBP12.21□□□□□ -0.45
GARNL3-210ENST00000453030 CBWD3Q5JTY5 395 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 CBWD5Q5RIA9 395 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 ARHGAP17Q68EM7 881 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 BHLHA9Q7RTU4 235 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 METTL3Q86U44 580 aaKnown RBP12.21□□□□□ -0.45
GARNL3-210ENST00000453030 FMNL3Q8IVF7 1028 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 TTC39CQ8N584 583 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 ANKRD52Q8NB46 1076 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 CYB5D2Q8WUJ1 264 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 DNASE2BQ8WZ79 361 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 TATDN2Q93075 761 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 ZDHHC5Q9C0B5 715 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 IL21RQ9HBE5 538 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 ITM2CQ9NQX7 267 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 TSPAN16Q9UKR8 245 aa12.21□□□□□ -0.45
GARNL3-210ENST00000453030 FAM237AA0A1B0GTK4 181 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 XPO1O14980 1071 aaKnown RBP12.2□□□□□ -0.46
GARNL3-210ENST00000453030 CETN3O15182 167 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 BCAT2O15382 392 aaPredicted RBP12.2□□□□□ -0.46
GARNL3-210ENST00000453030 MSI1O43347 362 aaKnown RBP12.2□□□□□ -0.46
GARNL3-210ENST00000453030 CD19P15391 556 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 HLA-FP30511 346 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 OXTRP30559 389 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 HARS2P49590 506 aaKnown RBP12.2□□□□□ -0.46
GARNL3-210ENST00000453030 ZNF132P52740 706 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 PDE4CQ08493 712 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 EDRF1Q3B7T1 1238 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 FAM217AQ8IXS0 508 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 SIX6OS1Q8N1H7 587 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 RBBP8NLQ8NC74 664 aaPredicted RBP12.2□□□□□ -0.46
GARNL3-210ENST00000453030 CADM4Q8NFZ8 388 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 SETD7Q8WTS6 366 aaKnown RBP12.2□□□□□ -0.46
GARNL3-210ENST00000453030 RNF139Q8WU17 664 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 EDEM1Q92611 657 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 IPO9Q96P70 1041 aaKnown RBP12.2□□□□□ -0.46
GARNL3-210ENST00000453030 GAREM1Q9H706 876 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 LRRC4Q9HBW1 653 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 OLA1Q9NTK5 396 aaKnown RBP12.2□□□□□ -0.46
GARNL3-210ENST00000453030 SFMBT1Q9UHJ3 866 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 EIF2B4Q9UI10 523 aaKnown RBP12.2□□□□□ -0.46
GARNL3-210ENST00000453030 LHX6Q9UPM6 363 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 FNDC3AQ9Y2H6 1198 aaKnown RBP12.2□□□□□ -0.46
GARNL3-210ENST00000453030 ZDHHC9Q9Y397 364 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 SLCO1B1Q9Y6L6 691 aa12.2□□□□□ -0.46
GARNL3-210ENST00000453030 METTL12A8MUP2 240 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 STX10O60499 249 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 CER1O95813 267 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 IGLV3-19P01714 112 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 MATKP42679 507 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 SGSHP51688 502 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 RING1Q06587 406 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 BST2Q10589 180 aaKnown RBP12.19□□□□□ -0.46
GARNL3-210ENST00000453030 LRMPQ12912 555 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 PNOCQ13519 176 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 CUL2Q13617 745 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 E2F5Q15329 346 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 TRIP4Q15650 581 aaPredicted RBP12.19□□□□□ -0.46
GARNL3-210ENST00000453030 MPPE1Q53F39 396 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 SGO2Q562F6 1265 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 PM20D1Q6GTS8 502 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 LAYNQ6UX15 382 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 CHST9Q7L1S5 443 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 OR2T3Q8NH03 318 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 UBA3Q8TBC4 463 aa12.19□□□□□ -0.46
GARNL3-210ENST00000453030 FAXDC2Q96IV6 333 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms