RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 SMIM5Q71RC9 77 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 GPR149Q86SP6 731 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 LRRTM4Q86VH4 590 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 CPOQ8IVL8 374 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 YAF2Q8IY57 180 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 TMTC2Q8N394 836 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 CCDC89Q8N998 374 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 GPR150Q8NGU9 434 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 OTUD7AQ8TE49 926 aaPredicted RBP4.92□□□□□ -1.62
LINC00393-202ENST00000452852 SPSB4Q96A44 273 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 NACC2Q96BF6 587 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 BOD1Q96IK1 185 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 MAELQ96JY0 434 aaKnown RBP4.92□□□□□ -1.62
LINC00393-202ENST00000452852 SNX27Q96L92 541 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 PNKPQ96T60 521 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 KATNAL1Q9BW62 490 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 PCDHAC1Q9H158 963 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 NECTIN3Q9NQS3 549 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 MRPS18AQ9NVS2 196 aaKnown RBP4.92□□□□□ -1.62
LINC00393-202ENST00000452852 SYBUQ9NX95 663 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 JKAMPQ9P055 326 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 BCCIPQ9P287 314 aaKnown RBP eCLIP4.92□□□□□ -1.62
LINC00393-202ENST00000452852 KIF17Q9P2E2 1029 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 XPR1Q9UBH6 696 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 KCNE5Q9UJ90 142 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 FBXO2Q9UK22 296 aaPredicted RBP4.92□□□□□ -1.62
LINC00393-202ENST00000452852 PACSIN3Q9UKS6 424 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 ZMYND8Q9ULU4 1186 aaPredicted RBP4.92□□□□□ -1.62
LINC00393-202ENST00000452852 MTO1Q9Y2Z2 717 aaKnown RBP4.92□□□□□ -1.62
LINC00393-202ENST00000452852 PLEKHM1Q9Y4G2 1056 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 AFDNP55196 1824 aaKnown RBP4.92□□□□□ -1.62
LINC00393-202ENST00000452852 CCDC88AQ3V6T2 1871 aa4.92□□□□□ -1.62
LINC00393-202ENST00000452852 UBR2Q8IWV8 1755 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 H7C4K7 107 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 KIF20AO95235 890 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 ITGAMP11215 1152 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 JUPP14923 745 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 RXRGP48443 463 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 COPAP53621 1224 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 PRKAA2P54646 552 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 EIF5P55010 431 aaKnown RBP4.91□□□□□ -1.62
LINC00393-202ENST00000452852 POU6F2P78424 691 aaPredicted RBP4.91□□□□□ -1.62
LINC00393-202ENST00000452852 COL10A1Q03692 680 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 CYP2A13Q16696 494 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 CC2D1BQ5T0F9 858 aaKnown RBP4.91□□□□□ -1.62
LINC00393-202ENST00000452852 VPS53Q5VIR6 699 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 ABHD17BQ5VST6 288 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 CFAP161Q6P656 301 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 KLHL17Q6TDP4 642 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 KIAA0408Q6ZU52 694 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 ZNF365Q70YC5 407 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 C2CD5Q86YS7 1000 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 SLC17A8Q8NDX2 589 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 FAM46DQ8NEK8 389 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 TMIEQ8NEW7 156 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 IPCEF1Q8WWN9 437 aaPredicted RBP4.91□□□□□ -1.62
LINC00393-202ENST00000452852 PYM1Q9BRP8 204 aaKnown RBP4.91□□□□□ -1.62
LINC00393-202ENST00000452852 TLR10Q9BXR5 811 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 TINAGL1Q9GZM7 467 aaPredicted RBP4.91□□□□□ -1.62
LINC00393-202ENST00000452852 OSBPL5Q9H0X9 879 aaPredicted RBP4.91□□□□□ -1.62
LINC00393-202ENST00000452852 ALG13Q9NP73 1137 aaKnown RBP4.91□□□□□ -1.62
LINC00393-202ENST00000452852 UBN1Q9NPG3 1134 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 HEYLQ9NQ87 328 aaPredicted RBP4.91□□□□□ -1.62
LINC00393-202ENST00000452852 WASH6PQ9NQA3 447 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 TMEM74BQ9NUR3 256 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 FEM1BQ9UK73 627 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 PXDNLA1KZ92 1463 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 CACNA1SQ13698 1873 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 SIPA1L3O60292 1781 aaPredicted RBP4.91□□□□□ -1.62
LINC00393-202ENST00000452852 DLEC1Q9Y238 1755 aa4.91□□□□□ -1.62
LINC00393-202ENST00000452852 C10orf71Q711Q0 1435 aa4.9□□□□□ -1.62
LINC00393-202ENST00000452852 SBF1O95248 1867 aa4.9□□□□□ -1.62
LINC00393-202ENST00000452852 TNRC6CQ9HCJ0 1690 aaKnown RBP4.9□□□□□ -1.62
LINC00393-202ENST00000452852 MRC1P22897 1456 aa4.9□□□□□ -1.62
LINC00393-202ENST00000452852 A0A0G2JLW4 131 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 ZNF500O60304 480 aaPredicted RBP4.9□□□□□ -1.63
LINC00393-202ENST00000452852 ERN1O75460 977 aaKnown RBP4.9□□□□□ -1.63
LINC00393-202ENST00000452852 ZFPL1O95159 310 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 HMOX1P09601 288 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 PECAM1P16284 738 aaPredicted RBP4.9□□□□□ -1.63
LINC00393-202ENST00000452852 CAPN3P20807 821 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 ACVR2AP27037 513 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 ELF1P32519 619 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 KRT9P35527 623 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 LIFRP42702 1097 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 CRKLP46109 303 aaKnown RBP4.9□□□□□ -1.63
LINC00393-202ENST00000452852 PNLIPRP1P54315 467 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 CUL4BQ13620 913 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 SLC29A2Q14542 456 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 MAPKAPK3Q16644 382 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.9□□□□□ -1.63
LINC00393-202ENST00000452852 KCTD20Q7Z5Y7 419 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 CCDC117Q8IWD4 279 aaPredicted RBP4.9□□□□□ -1.63
LINC00393-202ENST00000452852 COLGALT2Q8IYK4 626 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 TTC5Q8N0Z6 440 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 SUPT20HQ8NEM7 779 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 AFG1LQ8WV93 481 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 LINC00476Q8WZB0 136 aa4.9□□□□□ -1.63
LINC00393-202ENST00000452852 FUBP1Q96AE4 644 aaKnown RBP4.9□□□□□ -1.63
LINC00393-202ENST00000452852 EID2BQ96D98 161 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms