RNA–Protein interactions for RNA: ENST00000451964.5

CSNK1E-211, Transcript of casein kinase 1 epsilon, humanhuman

TSL 3

Gene CSNK1E, Length 873 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-211ENST00000451964 USP39Q53GS9 565 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 CCDC183Q5T5S1 534 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 RFWD3Q6PCD5 774 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 SASS6Q6UVJ0 657 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 TRMT11Q7Z4G4 463 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 TAC4Q86UU9 113 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 GPR161Q8N6U8 529 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 C1orf131Q8NDD1 294 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 HMGB4Q8WW32 186 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 RLN3Q8WXF3 142 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 AZIN2Q96A70 460 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 TMA16Q96EY4 203 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 LOXL4Q96JB6 756 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 PPP1R13BQ96KQ4 1090 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 GABRG3Q99928 467 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 HSD3B7Q9H2F3 369 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 ARRDC1-AS1Q9H2J1 176 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 ANO10Q9NW15 660 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 TMEM63CQ9P1W3 806 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 RAD54BQ9Y620 910 aa12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-211ENST00000451964 EPHB6O15197 1021 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 ACSL4O60488 711 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 LRP3O75074 770 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 ALDH1A2O94788 518 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 EPN2O95208 641 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 MBD3O95983 291 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 IGLV3-25P01717 112 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 ERBB2P04626 1255 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 CYP11B1P15538 503 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 GABRG2P18507 467 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 HLA-FP30511 346 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 KRT9P35527 623 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 P2RY2P41231 377 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 EIF4EBP2Q13542 120 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 CSRP2Q16527 193 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 STX1AQ16623 288 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 RSPO4Q2I0M5 234 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 MAP7D1Q3KQU3 841 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 PTPN20Q4JDL3 420 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 PIK3R6Q5UE93 754 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 NUGGCQ68CJ6 796 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 RNF43Q68DV7 783 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 UNC45BQ8IWX7 931 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 IPO4Q8TEX9 1081 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 SORCS1Q8WY21 1168 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 DDX1Q92499 740 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 SERPINB11Q96P15 392 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 STK33Q9BYT3 514 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 SLC2A11Q9BYW1 496 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 GANQ9H2C0 597 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 POPDC2Q9HBU9 364 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 ELOVL2Q9NXB9 296 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 THAP10Q9P2Z0 257 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 XPO7Q9UIA9 1087 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 MBD1Q9UIS9 605 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 TLR6Q9Y2C9 796 aa12.84□□□□□ -0.35
CSNK1E-211ENST00000451964 FAM170AA1A519 330 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 CAPN9O14815 690 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 GRAP2O75791 330 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 TRUB2O95900 331 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 ZNF18P17022 549 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 GBP1P32455 592 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 IL12RB1P42701 662 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 SLC11A2P49281 568 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 COPB1P53618 953 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 BPIFB4P59827 614 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 NNTQ13423 1086 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 ENPP2Q13822 863 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 DCAF6Q58WW2 860 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 ZC3H12AQ5D1E8 599 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 PLA2G2CQ5R387 149 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 SDE2Q6IQ49 451 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 OLFML1Q6UWY5 402 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 FAM183BPQ6ZVS7 135 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 APTXQ7Z2E3 356 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 ANKS1BQ7Z6G8 1248 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 NOP9Q86U38 636 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 DEFB106AQ8N104 65 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 PGBD3Q8N328 593 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 WFDC5Q8TCV5 224 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 LMLNQ96KR4 655 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 PRICKLE1Q96MT3 831 aaPredicted RBP12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 SLC2A13Q96QE2 648 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 NUCKS1Q9H1E3 243 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 SLC6A17Q9H1V8 727 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 SMOC1Q9H4F8 434 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 DLL3Q9NYJ7 618 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 BCCIPQ9P287 314 aaKnown RBP eCLIP12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 LIMA1Q9UHB6 759 aaKnown RBP12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 STON1Q9Y6Q2 735 aa12.83□□□□□ -0.36
CSNK1E-211ENST00000451964 CACNA1AO00555 2505 aa12.82□□□□□ -0.36
CSNK1E-211ENST00000451964 LRRC10BA6NIK2 292 aa12.82□□□□□ -0.36
CSNK1E-211ENST00000451964 F8VZ95 297 aa12.82□□□□□ -0.36
CSNK1E-211ENST00000451964 IRAK2O43187 625 aa12.82□□□□□ -0.36
CSNK1E-211ENST00000451964 GDF9O60383 454 aa12.82□□□□□ -0.36
CSNK1E-211ENST00000451964 TBL1XO60907 577 aa12.82□□□□□ -0.36
CSNK1E-211ENST00000451964 RHOBTB1O94844 696 aa12.82□□□□□ -0.36
CSNK1E-211ENST00000451964 GLI1P08151 1106 aa12.82□□□□□ -0.36
CSNK1E-211ENST00000451964 NDUFV2P19404 249 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms