RNA–Protein interactions for RNA: ENST00000450303.6

PRPF40A-204, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-204ENST00000450303 PM20D1Q6GTS8 502 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 TMEM92Q6UXU6 159 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 Q6ZNB5 142 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 BHLHA9Q7RTU4 235 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 ARHGAP18Q8N392 663 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 ZNF276Q8N554 614 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 GPR161Q8N6U8 529 aaKnown RBP17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 IL17RCQ8NAC3 791 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 PDCL3Q9H2J4 239 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 DNAJC17Q9NVM6 304 aaKnown RBP17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 PLK2Q9NYY3 685 aa17.8■□□□□ 0.44
PRPF40A-204ENST00000450303 SLC12A8A0AV02 714 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 CHRM1P11229 460 aaPredicted RBP17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 CYP11B1P15538 503 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 COG7P83436 770 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 CDK17Q00537 523 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 CCDC6Q16204 474 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 CRY1Q16526 586 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 PKDCCQ504Y2 493 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 DNTTIP2Q5QJE6 756 aaKnown RBP17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 C10orf76Q5T2E6 689 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 ANO7Q6IWH7 933 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 LCLAT1Q6UWP7 414 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 IRF2BP2Q7Z5L9 587 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 EDEM1Q92611 657 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 P2RY11Q96G91 374 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 XPO6Q96QU8 1125 aaKnown RBP17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 CDK5RAP1Q96SZ6 601 aaKnown RBP17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 MARCH2Q9P0N8 246 aa17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.79■□□□□ 0.44
PRPF40A-204ENST00000450303 M0QYV0 167 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 GABBR2O75899 941 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 TNFAIP3P21580 790 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 CORO1AP31146 461 aaKnown RBP17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 WASP42768 502 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 TERF1P54274 439 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 CNGA2Q16280 664 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 MEA1Q16626 185 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 GRAMD4Q6IC98 578 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 PMF1Q6P1K2 205 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 TOGARAM2Q6ZUX3 1019 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 SLC47A2Q86VL8 602 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 TMTC1Q8IUR5 882 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 SIX6OS1Q8N1H7 587 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 TERB1Q8NA31 727 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 CCDC112Q8NEF3 446 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 ZNF606Q8WXB4 792 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 ERLEC1Q96DZ1 483 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 ZNF830Q96NB3 372 aaPredicted RBP17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 ARRDC1-AS1Q9H2J1 176 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 DEF6Q9H4E7 631 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 HAUS4Q9H6D7 363 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 SEMA4GQ9NTN9 838 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 WDR35Q9P2L0 1181 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 EBF1Q9UH73 591 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 SFMBT1Q9UHJ3 866 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 HCN2Q9UL51 889 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 STRIP2Q9ULQ0 834 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 CEP83Q9Y592 693 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 CEP250Q9BV73 2442 aa17.78■□□□□ 0.44
PRPF40A-204ENST00000450303 ABCA7Q8IZY2 2146 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 YJEFN3A6XGL0 299 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 E7ENQ6 273 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 ADAM23O75077 832 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 SETSIPP0DME0 302 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 PLK5Q496M5 336 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 EOGTQ5NDL2 527 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 BSPRYQ5W0U4 402 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 DENND1CQ8IV53 801 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 ZNF513Q8N8E2 541 aaPredicted RBP17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 MDGA1Q8NFP4 955 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 EPS8L1Q8TE68 723 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 SLC35F5Q8WV83 523 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 KCTD13Q8WZ19 329 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 BAG1Q99933 345 aaPredicted RBP17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 AGPAT1Q99943 283 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 DUSP15Q9H1R2 295 aaPredicted RBP17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 MARK1Q9P0L2 795 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 AGO1Q9UL18 857 aaKnown RBP17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 DMXL1Q9Y485 3027 aa17.77■□□□□ 0.44
PRPF40A-204ENST00000450303 SSU72P8A0A1W2PR75 194 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 CACNG3O60359 315 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 CISD3P0C7P0 127 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 SKILP12757 684 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 GBP1P32455 592 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 DGKGP49619 791 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 DAOAP59103 153 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 CDR2Q01850 454 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 LMNB2Q03252 620 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 PREPLQ4J6C6 727 aaPredicted RBP17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 TRIM72Q6ZMU5 477 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 NUDT18Q6ZVK8 323 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 RASSF3Q86WH2 238 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 LRRC8AQ8IWT6 810 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 CLEC4CQ8WTT0 213 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 RNF139Q8WU17 664 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 CCDC42Q96M95 316 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 ACOX2Q99424 681 aa17.76■□□□□ 0.43
PRPF40A-204ENST00000450303 DCLK3Q9C098 648 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms