RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 SLMAPQ14BN4 828 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 TPGS2Q68CL5 300 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 HIBCHQ6NVY1 386 aaPredicted RBP14.76□□□□□ -0.05
USP39-207ENST00000450066 MSANTD2Q6P1R3 559 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 BZW1Q7L1Q6 419 aaKnown RBP14.76□□□□□ -0.05
USP39-207ENST00000450066 FAM71DQ8N9W8 422 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 SERPINB11Q96P15 392 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 ADAM7Q9H2U9 754 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 MED4Q9NPJ6 270 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 PRDM10Q9NQV6 1147 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 ETNK2Q9NVF9 386 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 ATP8A1Q9Y2Q0 1164 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 MYO16Q9Y6X6 1858 aa14.76□□□□□ -0.05
USP39-207ENST00000450066 FAM72CH0Y354 149 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 AGPSO00116 658 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 ATF6P18850 670 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 CCR1P32246 355 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 SLC10A2Q12908 348 aaPredicted RBP14.75□□□□□ -0.05
USP39-207ENST00000450066 PPP2R5DQ14738 602 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 UAP1Q16222 522 aaPredicted RBP14.75□□□□□ -0.05
USP39-207ENST00000450066 FAM72AQ5TYM5 149 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 FAM72DQ6L9T8 149 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 FAM72BQ86X60 149 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 GPR65Q8IYL9 337 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 RTP4Q96DX8 246 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 HAPLN3Q96S86 360 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 OSBPL2Q9H1P3 480 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 USP29Q9HBJ7 922 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 TLR8Q9NR97 1041 aaKnown RBP14.75□□□□□ -0.05
USP39-207ENST00000450066 DTLQ9NZJ0 730 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 OR12D3Q9UGF7 316 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 SFMBT1Q9UHJ3 866 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 TPX2Q9ULW0 747 aaKnown RBP14.75□□□□□ -0.05
USP39-207ENST00000450066 PCDHB12Q9Y5F1 795 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 URODP06132 367 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 RARGP13631 454 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 GGCXP38435 758 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 PMS2P54278 862 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 TAF10Q12962 218 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 HSP90B2PQ58FF3 399 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 PCGF5Q86SE9 256 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 CDKL3Q8IVW4 592 aaPredicted RBP14.75□□□□□ -0.05
USP39-207ENST00000450066 ZIM3Q96PE6 472 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 EPAS1Q99814 870 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 TTLL2Q9BWV7 592 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 FOXP3Q9BZS1 431 aa14.75□□□□□ -0.05
USP39-207ENST00000450066 SLC38A8A6NNN8 435 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 DCLK1O15075 740 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 RPL22P35268 128 aaKnown RBP14.74□□□□□ -0.05
USP39-207ENST00000450066 TPI1P60174 286 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 MORF4L2Q15014 288 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 PAFAH1B3Q15102 231 aaKnown RBP14.74□□□□□ -0.05
USP39-207ENST00000450066 SLC45A4Q5BKX6 768 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 PSRC1Q6PGN9 363 aaPredicted RBP14.74□□□□□ -0.05
USP39-207ENST00000450066 VPS52Q8N1B4 723 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 UBLCP1Q8WVY7 318 aaPredicted RBP14.74□□□□□ -0.05
USP39-207ENST00000450066 OLFM3Q96PB7 478 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 RUFY1Q96T51 708 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 PABPC3Q9H361 631 aaKnown RBP14.74□□□□□ -0.05
USP39-207ENST00000450066 OLA1Q9NTK5 396 aaKnown RBP14.74□□□□□ -0.05
USP39-207ENST00000450066 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.74□□□□□ -0.05
USP39-207ENST00000450066 TLR6Q9Y2C9 796 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 INSL6Q9Y581 213 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 PTPRSQ13332 1948 aa14.74□□□□□ -0.05
USP39-207ENST00000450066 H3BQF6 201 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 MSI1O43347 362 aaKnown RBP14.73□□□□□ -0.05
USP39-207ENST00000450066 ZDHHC11BP0C7U3 371 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 FAM193AP78312 1265 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 RAB33AQ14088 237 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 TMEM240Q5SV17 173 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 RNASEH2BQ5TBB1 312 aaKnown RBP14.73□□□□□ -0.05
USP39-207ENST00000450066 FIBCD1Q8N539 461 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 GIPC2Q8TF65 315 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 QKIQ96PU8 341 aaKnown RBP eCLIP14.73□□□□□ -0.05
USP39-207ENST00000450066 MRPL17Q9NRX2 175 aaKnown RBP14.73□□□□□ -0.05
USP39-207ENST00000450066 NUDT5Q9UKK9 219 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 KCNU1A8MYU2 1149 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 HACD1B0YJ81 288 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 KCNN4O15554 427 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 MAP3K6O95382 1288 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 SEC24AO95486 1093 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 SYF2O95926 243 aaKnown RBP14.73□□□□□ -0.05
USP39-207ENST00000450066 LINC00271P0C7V0 271 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 SLC2A3P11169 496 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 ERCC2P18074 760 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 RBL1P28749 1068 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 HTR7P34969 479 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 GREB1Q4ZG55 1949 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 RASIP1Q5U651 963 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 LRIG3Q6UXM1 1119 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 PDZD4Q76G19 769 aaPredicted RBP14.73□□□□□ -0.05
USP39-207ENST00000450066 B4GALNT4Q76KP1 1039 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 ZCCHC9Q8N567 271 aaKnown RBP14.73□□□□□ -0.05
USP39-207ENST00000450066 CLP1Q92989 425 aaKnown RBP14.73□□□□□ -0.05
USP39-207ENST00000450066 SH3GL2Q99962 352 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 ZBED2Q9BTP6 218 aa14.73□□□□□ -0.05
USP39-207ENST00000450066 UBE2OQ9C0C9 1292 aaKnown RBP14.73□□□□□ -0.05
USP39-207ENST00000450066 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.73□□□□□ -0.05
USP39-207ENST00000450066 CXXC1Q9P0U4 656 aaPredicted RBP14.73□□□□□ -0.05
USP39-207ENST00000450066 SHOC2Q9UQ13 582 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms