RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 SLC36A4Q6YBV0 504 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 ARMCX6Q7L4S7 300 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 TMEFF1Q8IYR6 380 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 FRMD1Q8N878 549 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 STK32AQ8WU08 396 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 DDX1Q92499 740 aaKnown RBP15.91■□□□□ 0.14
CHD3-205ENST00000449744 PIGKQ92643 395 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 TCEAL3Q969E4 200 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 PIWIL1Q96J94 861 aaKnown RBP15.91■□□□□ 0.14
CHD3-205ENST00000449744 SERPINB11Q96P15 392 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 RXFP3Q9NSD7 469 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 ELOVL2Q9NXB9 296 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 STOML2Q9UJZ1 356 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 CLEC4EQ9ULY5 219 aa15.91■□□□□ 0.14
CHD3-205ENST00000449744 WASH3PC4AMC7 463 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 AP5Z1O43299 807 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 TIMM44O43615 452 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 SYNCRIPO60506 623 aaKnown RBP15.9■□□□□ 0.14
CHD3-205ENST00000449744 PRKCSHP14314 528 aaPredicted RBP15.9■□□□□ 0.14
CHD3-205ENST00000449744 NDUFV2P19404 249 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 KCNA4P22459 653 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 PON1P27169 355 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 HOXD9P28356 352 aaPredicted RBP15.9■□□□□ 0.14
CHD3-205ENST00000449744 RPL34P49207 117 aaKnown RBP15.9■□□□□ 0.14
CHD3-205ENST00000449744 RPL6Q02878 288 aaKnown RBP15.9■□□□□ 0.14
CHD3-205ENST00000449744 RING1Q06587 406 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 SPDYCQ5MJ68 293 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 STPG1Q5TH74 334 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 LYSMD4Q5XG99 296 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 RNF43Q68DV7 783 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 KIAA1324Q6UXG2 1013 aaKnown RBP15.9■□□□□ 0.14
CHD3-205ENST00000449744 ABCA7Q8IZY2 2146 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 DDX50Q9BQ39 737 aaKnown RBP15.9■□□□□ 0.14
CHD3-205ENST00000449744 SLC4A5Q9BY07 1137 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 ACP6Q9NPH0 428 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 THAP10Q9P2Z0 257 aaPredicted RBP15.9■□□□□ 0.14
CHD3-205ENST00000449744 MBD1Q9UIS9 605 aaPredicted RBP15.9■□□□□ 0.14
CHD3-205ENST00000449744 NAALADL1Q9UQQ1 740 aa15.9■□□□□ 0.14
CHD3-205ENST00000449744 TPRP12270 2363 aaKnown RBP15.89■□□□□ 0.13
CHD3-205ENST00000449744 TYW5A2RUC4 315 aaKnown RBP15.89■□□□□ 0.13
CHD3-205ENST00000449744 BECN2A8MW95 431 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 E5RJQ4 531 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 PES1O00541 588 aaKnown RBP15.89■□□□□ 0.13
CHD3-205ENST00000449744 IRAK2O43187 625 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 ACSL4O60488 711 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 IGLV3-27P01718 113 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 DPP6P42658 865 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 IL12RB1P42701 662 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 APBA1Q02410 837 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 PTK2Q05397 1052 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 ZNF234Q14588 700 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 VWA3BQ502W6 1294 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 DQX1Q8TE96 717 aaKnown RBP15.89■□□□□ 0.13
CHD3-205ENST00000449744 WFIKKN2Q8TEU8 576 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 SHC3Q92529 594 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 AZIN2Q96A70 460 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 MRGPRX1Q96LB2 322 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 TUBGCP2Q9BSJ2 902 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 EDEM2Q9BV94 578 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 IRX2Q9BZI1 471 aaPredicted RBP15.89■□□□□ 0.13
CHD3-205ENST00000449744 NDST4Q9H3R1 872 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 CD248Q9HCU0 757 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 DNAJC12Q9UKB3 198 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 CYP8B1Q9UNU6 501 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 TLR6Q9Y2C9 796 aa15.89■□□□□ 0.13
CHD3-205ENST00000449744 FRYLO94915 3013 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 IGHV1OR15-9A0A0B4J2B8 117 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 GOLGA6L7A0A1B0GV03 622 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 PAPSS1O43252 624 aaPredicted RBP15.88■□□□□ 0.13
CHD3-205ENST00000449744 TBL1XO60907 577 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 FYNP06241 537 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 PTGER3P43115 390 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 PDCLQ13371 301 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 NNTQ13423 1086 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 HSP90AA4PQ58FG1 418 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 PPM1JQ5JR12 505 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 PIK3R6Q5UE93 754 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 SMYD5Q6GMV2 418 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 RFWD3Q6PCD5 774 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 SERPINA13PQ6UXR4 307 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 CLEC17AQ6ZS10 378 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 CHST9Q7L1S5 443 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 BEND5Q7L4P6 421 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 TMEM110Q86TL2 294 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 SYT12Q8IV01 421 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 CCDC117Q8IWD4 279 aaPredicted RBP15.88■□□□□ 0.13
CHD3-205ENST00000449744 DEFB119Q8N690 84 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 ZNF557Q8N988 423 aaPredicted RBP15.88■□□□□ 0.13
CHD3-205ENST00000449744 ADAM32Q8TC27 787 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 NOX5Q96PH1 765 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 POPDC2Q9HBU9 364 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 ABCB8Q9NUT2 735 aa15.88■□□□□ 0.13
CHD3-205ENST00000449744 NDUFS2O75306 463 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 APOEP02649 317 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 EPHX1P07099 455 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 PABPC1P11940 636 aaKnown RBP15.87■□□□□ 0.13
CHD3-205ENST00000449744 HLA-FP30511 346 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 KRT9P35527 623 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 SNX16P57768 344 aa15.87■□□□□ 0.13
CHD3-205ENST00000449744 YWHAZP63104 245 aaKnown RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms