RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 OSBPL2Q9H1P3 480 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 CATSPERBQ9H7T0 1116 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 WDR6Q9NNW5 1121 aaKnown RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 GDF3Q9NR23 364 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.03□□□□□ -0.8
RFC4-210ENST00000449502 ARHGEF38Q9NXL2 777 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 DONSONQ9NYP3 566 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 CWC15Q9P013 229 aaKnown RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 CALCOCO1Q9P1Z2 691 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 MTRF1LQ9UGC7 380 aaKnown RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 DMGDHQ9UI17 866 aaKnown RBP10.03□□□□□ -0.8
RFC4-210ENST00000449502 DNPEPQ9ULA0 475 aa10.03□□□□□ -0.8
RFC4-210ENST00000449502 SCN5AQ14524 2016 aa10.02□□□□□ -0.8
RFC4-210ENST00000449502 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.02□□□□□ -0.81
RFC4-210ENST00000449502 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.02□□□□□ -0.81
RFC4-210ENST00000449502 ESYT3A0FGR9 886 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 CFAP69A5D8W1 941 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 ZNF840PA6NDX5 716 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 C2orf71A6NGG8 1288 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 GRXCR1A8MXD5 290 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 C5orf67F2Z3F1 127 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 STK10O94804 968 aaKnown RBP10.02□□□□□ -0.81
RFC4-210ENST00000449502 IFNB1P01574 187 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 IGLV3-25P01717 112 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 KRT14P02533 472 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 ITGAVP06756 1048 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 C8AP07357 584 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 CA3P07451 260 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 ZDHHC11BP0C7U3 371 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 LINC00271P0C7V0 271 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 SPATA31D3P0C874 917 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 SRGAP2BP0DMP2 458 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 RBP3P10745 1247 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 MYOGP15173 224 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 GOT1P17174 413 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 AMPD1P23109 780 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 TNFRSF8P28908 595 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 EPHB2P29323 1055 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 HTR7P34969 479 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 SERPINB6P35237 376 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 PTGIRP43119 386 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 HCAR3P49019 387 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 HARS2P49590 506 aaKnown RBP10.02□□□□□ -0.81
RFC4-210ENST00000449502 CLCN6P51797 869 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 ERVFC1P60507 584 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 COG7P83436 770 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 GPM6BQ13491 265 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 NOMO1Q15155 1222 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 RAB30Q15771 203 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 NUGGCQ68CJ6 796 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 SLC9A4Q6AI14 798 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 SPATA31D4Q6ZUB0 917 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 RTL10Q7L3V2 364 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 ZC3H18Q86VM9 953 aaKnown RBP10.02□□□□□ -0.81
RFC4-210ENST00000449502 ZDHHC14Q8IZN3 488 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 PLD5Q8N7P1 536 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 EIF1ADQ8N9N8 165 aaKnown RBP10.02□□□□□ -0.81
RFC4-210ENST00000449502 PCDH19Q8TAB3 1148 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 HNRNPLLQ8WVV9 542 aaKnown RBP10.02□□□□□ -0.81
RFC4-210ENST00000449502 CASKIN2Q8WXE0 1202 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 MRPS31Q92665 395 aaKnown RBP10.02□□□□□ -0.81
RFC4-210ENST00000449502 SLCO2A1Q92959 643 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 PSMG2Q969U7 264 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 FAF2Q96CS3 445 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 TBC1D31Q96DN5 1066 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 TRMT2BQ96GJ1 504 aaKnown RBP10.02□□□□□ -0.81
RFC4-210ENST00000449502 MYRFLQ96LU7 910 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 HERPUD2Q9BSE4 406 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 ADAM33Q9BZ11 813 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 ACBD3Q9H3P7 528 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 OSER1Q9NX31 292 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 OR12D3Q9UGF7 316 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 SNX24Q9Y343 169 aa10.02□□□□□ -0.81
RFC4-210ENST00000449502 HBS1LQ9Y450 684 aaKnown RBP10.02□□□□□ -0.81
RFC4-210ENST00000449502 TDRD15B5MCY1 1934 aaKnown RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 HACD1B0YJ81 288 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 PPP1R12AO14974 1030 aaPredicted RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 FGF10O15520 208 aaPredicted RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 XYLBO75191 536 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 PAGE1O75459 146 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 FGF19O95750 216 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 TBX18O95935 607 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 PECAM1P16284 738 aaPredicted RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 ITIH2P19823 946 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 MX2P20592 715 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 IL4RP24394 825 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 STIP1P31948 543 aaKnown RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 SLC11A2P49281 568 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 CARSP49589 748 aaKnown RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 VPS41P49754 854 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 PGFP49763 221 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 TUBP50607 506 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 DRG2P55039 364 aaKnown RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 RBM10P98175 930 aaKnown RBP10.01□□□□□ -0.81
RFC4-210ENST00000449502 CAV1Q03135 178 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 ADCY2Q08462 1091 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 XRCC4Q13426 336 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 PTK6Q13882 451 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 PDK1Q15118 436 aa10.01□□□□□ -0.81
RFC4-210ENST00000449502 TRIP13Q15645 432 aaPredicted RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms