RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 AMPD2Q01433 879 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 RUNX3Q13761 415 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 PLEKHA7Q6IQ23 1121 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 MSANTD2Q6P1R3 559 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 ARCQ7LC44 396 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 BHLHA9Q7RTU4 235 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 KIAA1328Q86T90 577 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 C1orf210Q8IVY1 113 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 SH3RF2Q8TEC5 729 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 RXFP2Q8WXD0 754 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 ATOH1Q92858 354 aaPredicted RBP9.56□□□□□ -0.88
RFX3-207ENST00000449190 RNF25Q96BH1 459 aaPredicted RBP9.56□□□□□ -0.88
RFX3-207ENST00000449190 ZFYVE19Q96K21 471 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 SERPINB11Q96P15 392 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 SLC22A12Q96S37 553 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 THAP2Q9H0W7 228 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 LMAN1LQ9HAT1 526 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 SMPD4Q9NXE4 827 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 GTSE1Q9NYZ3 720 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 CTTNBP2NLQ9P2B4 639 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 LCMT1Q9UIC8 334 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 INTUQ9ULD6 942 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 ZNF510Q9Y2H8 683 aa9.56□□□□□ -0.88
RFX3-207ENST00000449190 HBS1LQ9Y450 684 aaKnown RBP9.56□□□□□ -0.88
RFX3-207ENST00000449190 SYNJ2BP-COX16A0A087WUM0 186 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 E2F8A0AVK6 867 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 SPECC1L-ADORA2AF8WAN1 911 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 M0QYT0 321 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 LEFTY2O00292 366 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 SLC9A3R1O14745 358 aaPredicted RBP9.55□□□□□ -0.88
RFX3-207ENST00000449190 MDM4O15151 490 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 LCA5LO95447 670 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 CYP1A2P05177 515 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 FYNP06241 537 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 IRF1P10914 325 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 SLC2A3P11169 496 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 CHRNB1P11230 501 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 GPD1P21695 349 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 SULT1E1P49888 294 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 TBX4P57082 545 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 DEUP1Q05D60 604 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 TNK2Q07912 1038 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 USP4Q13107 963 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 NR1H3Q13133 447 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 NME3Q13232 169 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 MTA1Q13330 715 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 MAMLD1Q13495 774 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 MTF1Q14872 753 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 ANGPT1Q15389 498 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 TRIP4Q15650 581 aaPredicted RBP9.55□□□□□ -0.88
RFX3-207ENST00000449190 ZNF77Q15935 545 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 SLC25A52Q3SY17 297 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 DGKKQ5KSL6 1271 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 SYPL2Q5VXT5 272 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 DNAAF5Q86Y56 855 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 UNC45BQ8IWX7 931 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 RHOT2Q8IXI1 618 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 OLIG1Q8TAK6 271 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 DQX1Q8TE96 717 aaKnown RBP9.55□□□□□ -0.88
RFX3-207ENST00000449190 OSCP1Q8WVF1 389 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 PLD4Q96BZ4 506 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 PIWIL1Q96J94 861 aaKnown RBP9.55□□□□□ -0.88
RFX3-207ENST00000449190 PDLIM2Q96JY6 352 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 MCEEQ96PE7 176 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 NCAPGQ9BPX3 1015 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 IER2Q9BTL4 223 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 KLF16Q9BXK1 252 aaPredicted RBP9.55□□□□□ -0.88
RFX3-207ENST00000449190 HPS4Q9NQG7 708 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 DDIT4Q9NX09 232 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 DUS2Q9NX74 493 aaKnown RBP9.55□□□□□ -0.88
RFX3-207ENST00000449190 COX16Q9P0S2 106 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 CFAP97Q9P2B7 532 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 UVRAGQ9P2Y5 699 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 SFMBT1Q9UHJ3 866 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 TMEM59LQ9UK28 342 aa9.55□□□□□ -0.88
RFX3-207ENST00000449190 TMEM191CA6NGB0 347 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 PROB1E7EW31 1015 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 MYO1FO00160 1098 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 TRDMT1O14717 391 aaKnown RBP9.54□□□□□ -0.88
RFX3-207ENST00000449190 LAMTOR5O43504 91 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 RNF8O76064 485 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 TRUB2O95900 331 aaKnown RBP9.54□□□□□ -0.88
RFX3-207ENST00000449190 APOEP02649 317 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 PSMA2P25787 234 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 CCR1P32246 355 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 CTHP32929 405 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 RFC1P35251 1148 aaPredicted RBP9.54□□□□□ -0.88
RFX3-207ENST00000449190 NOP2P46087 812 aaKnown RBP9.54□□□□□ -0.88
RFX3-207ENST00000449190 SOX9P48436 509 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 IFNAR2P48551 515 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 SLC11A2P49281 568 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 ZNF143P52747 638 aaPredicted RBP9.54□□□□□ -0.88
RFX3-207ENST00000449190 NAP1L1P55209 391 aaKnown RBP9.54□□□□□ -0.88
RFX3-207ENST00000449190 ZXDBP98169 803 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 NNTQ13423 1086 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 NUGGCQ68CJ6 796 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 RAD9BQ6WBX8 426 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 TAC4Q86UU9 113 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 ADGRG2Q8IZP9 1017 aa9.54□□□□□ -0.88
RFX3-207ENST00000449190 SYNPOQ8N3V7 929 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms