RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 PGFP49763 221 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 RPL6Q02878 288 aaKnown RBP14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 ZNF252P-AS1Q0IIN9 211 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 INCA1Q0VD86 236 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 DRAP1Q14919 205 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 PEAR1Q5VY43 1037 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 E4F1Q66K89 784 aaPredicted RBP14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 SPECC1LQ69YQ0 1117 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 CLEC20AQ6ZU45 233 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 BAP1Q92560 729 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 FAXDC2Q96IV6 333 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 TWNKQ96RR1 684 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 CDK5RAP1Q96SZ6 601 aaKnown RBP14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 ZDHHC4Q9NPG8 344 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 FAM49BQ9NUQ9 324 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 TMEM74BQ9NUR3 256 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 SLC6A14Q9UN76 642 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 ZNF510Q9Y2H8 683 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 USP24Q9UPU5 2620 aa14.4□□□□□ -0.1
PDLIM2-213ENST00000448520 A0A1W2PQF6 199 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 HHLA1C9JL84 531 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 NEDD8-MDP1E9PL57 170 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 SERPINF2P08697 491 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 RALAP11233 206 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 RARGP13631 454 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 ENGP17813 658 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 ITPKAP23677 461 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 ADORA2BP29275 332 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 CDC25BP30305 580 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 CASP14P31944 242 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 USP8P40818 1118 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 KIF11P52732 1056 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 ATXN3P54252 364 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 COG7P83436 770 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 GCNT1Q02742 428 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 TBX2Q13207 712 aaPredicted RBP14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 E2F5Q15329 346 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 ZNF394Q53GI3 561 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 TPGS1Q6ZTW0 290 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 ARMCX6Q7L4S7 300 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 DRC7Q8IY82 874 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 CHPFQ8IZ52 775 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 HDDC3Q8N4P3 179 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 TTC39CQ8N584 583 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 IPO4Q8TEX9 1081 aaKnown RBP14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 DUSP16Q9BY84 665 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 ACP6Q9NPH0 428 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 CISHQ9NSE2 258 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 MTPAPQ9NVV4 582 aaKnown RBP eCLIP14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 OSER1Q9NX31 292 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 HCN2Q9UL51 889 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 PCDHB4Q9Y5E5 795 aa14.39□□□□□ -0.11
PDLIM2-213ENST00000448520 TNRC6BQ9UPQ9 1833 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 LRRC53A6NM62 1247 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 F8VZ95 297 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 FOXN3O00409 490 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 NPC1O15118 1278 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 TRIM24O15164 1050 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 CISD3P0C7P0 127 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 KRT5P13647 590 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 TBXAS1P24557 533 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 RDXP35241 583 aaKnown RBP14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 CHKAP35790 457 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 DGKGP49619 791 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 ZNF132P52740 706 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 MFAP3P55082 362 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 JAM2P57087 298 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 GFPT1Q06210 699 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 ZNF33AQ06730 810 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 FOXC1Q12948 553 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 ARID5BQ14865 1188 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 C10orf120Q5SQS8 335 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 EGFLAMQ63HQ2 1017 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 CCDC186Q7Z3E2 898 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 SHC3Q92529 594 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 GABRG3Q99928 467 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 UBXN6Q9BZV1 441 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 DCLK3Q9C098 648 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 FAM124BQ9H5Z6 455 aaPredicted RBP14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 CLIC5Q9NZA1 410 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 CALCOCO1Q9P1Z2 691 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 FBXO10Q9UK96 956 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 WASF3Q9UPY6 502 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 USP3Q9Y6I4 520 aa14.38□□□□□ -0.11
PDLIM2-213ENST00000448520 CEP295Q9C0D2 2601 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 IGHV1OR15-9A0A0B4J2B8 117 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 A0A1W2PQH9 124 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 PRRT4C9JH25 899 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 CYP26A1O43174 497 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 CILPO75339 1184 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 GFPT2O94808 682 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 CFIP05156 583 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 SYPP08247 313 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 WASP42768 502 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 MAPK8P45983 427 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 RAD23BP54727 409 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 ADKP55263 362 aaKnown RBP14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 SEMA3BQ13214 749 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 FIGNQ5HY92 759 aa14.37□□□□□ -0.11
PDLIM2-213ENST00000448520 TMEM270Q6UE05 265 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms