RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 ACTL7BQ9Y614 415 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 PSAT1Q9Y617 370 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 MGEA5O60502 916 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 NEBLO76041 1014 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 GHRP10912 638 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 PSMB4P28070 264 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 MATKP42679 507 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 XRCC4Q13426 336 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 GALNTL6Q49A17 601 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 PREPLQ4J6C6 727 aaPredicted RBP15.3■□□□□ 0.04
SF1-211ENST00000448404 SLC45A4Q5BKX6 768 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 C16orf46Q6P387 395 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 VPS52Q8N1B4 723 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 ARMC2Q8NEN0 867 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 SLC44A1Q8WWI5 657 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 KLC2Q9H0B6 622 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 PRDM12Q9H4Q4 367 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 SLC24A3Q9HC58 644 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 SLC45A1Q9Y2W3 748 aa15.3■□□□□ 0.04
SF1-211ENST00000448404 GOLGA8TH3BQL2 631 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 AP1G2O75843 785 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 CD4P01730 458 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 NPR3P17342 541 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 TGM2P21980 687 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 GBP2P32456 591 aaPredicted RBP15.29■□□□□ 0.04
SF1-211ENST00000448404 SATB1Q01826 763 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 BNIP1Q12981 228 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 CRHR2Q13324 411 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 KLHL38Q2WGJ6 581 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 TTC7BQ86TV6 843 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 SIX6OS1Q8N1H7 587 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 RNF139Q8WU17 664 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 CENPIQ92674 756 aaPredicted RBP15.29■□□□□ 0.04
SF1-211ENST00000448404 P2RY11Q96G91 374 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 CELF6Q96J87 481 aaKnown RBP15.29■□□□□ 0.04
SF1-211ENST00000448404 SIGLEC10Q96LC7 697 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 DUSP16Q9BY84 665 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 USP3Q9Y6I4 520 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 RNF103O00237 685 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 CAPN9O14815 690 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 CHADO15335 359 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 NCAM1P13591 858 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 MGAT1P26572 445 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 CD52P31358 61 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 PTPN9P43378 593 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 CRYBB1P53674 252 aaPredicted RBP15.29■□□□□ 0.04
SF1-211ENST00000448404 MRPS5P82675 430 aaKnown RBP15.29■□□□□ 0.04
SF1-211ENST00000448404 STILQ15468 1287 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 ANKRD20A2Q5SQ80 823 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 ANKRD20A1Q5TYW2 823 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 ANKRD20A3Q5VUR7 823 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 MTDHQ86UE4 582 aaKnown RBP15.29■□□□□ 0.04
SF1-211ENST00000448404 NPWQ8N729 165 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 AZIN2Q96A70 460 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 ZNF560Q96MR9 790 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 PPP1R10Q96QC0 940 aaKnown RBP15.29■□□□□ 0.04
SF1-211ENST00000448404 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 FZD10Q9ULW2 581 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 DERAQ9Y315 318 aa15.29■□□□□ 0.04
SF1-211ENST00000448404 BCLAF3A2AJT9 711 aaKnown RBP15.28■□□□□ 0.04
SF1-211ENST00000448404 DCAF8L1A6NGE4 600 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 KCNE1P15382 129 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 VSIG1Q86XK7 387 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 COLGALT1Q8NBJ5 622 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 SCAMP5Q8TAC9 235 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 TEKT4Q8WW24 435 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 HTR3CQ8WXA8 447 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 MOCOSQ96EN8 888 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 SRPK1Q96SB4 655 aaKnown RBP15.28■□□□□ 0.04
SF1-211ENST00000448404 FAM105AQ9NUU6 356 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 TMLHEQ9NVH6 421 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 GDAP2Q9NXN4 497 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 SMG5Q9UPR3 1016 aaKnown RBP15.28■□□□□ 0.04
SF1-211ENST00000448404 ARL5CA6NH57 179 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 DNAJC8O75937 253 aaPredicted RBP15.28■□□□□ 0.04
SF1-211ENST00000448404 OR4Q2P0C623 313 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 CPT1AP50416 773 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 DEUP1Q05D60 604 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 PPP2R5DQ14738 602 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 SV2CQ496J9 727 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 TIGD5Q53EQ6 642 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 AGMOQ6ZNB7 445 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 RASAL3Q86YV0 1011 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 PNPLA1Q8N8W4 532 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 UTP4Q969X6 686 aaKnown RBP15.28■□□□□ 0.04
SF1-211ENST00000448404 FAXDC2Q96IV6 333 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 RXFP1Q9HBX9 757 aa15.28■□□□□ 0.04
SF1-211ENST00000448404 BDNFP23560 247 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 ARL4AP40617 200 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 SLC25A52Q3SY17 297 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 SDHAF4Q5VUM1 108 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 DSTYKQ6XUX3 929 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 SH2D5Q6ZV89 423 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 USP33Q8TEY7 942 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 C10orf82Q8WW14 230 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 C20orf27Q9GZN8 174 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 MANSC1Q9H8J5 431 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 ARMCX1Q9P291 453 aa15.27■□□□□ 0.04
SF1-211ENST00000448404 FAM237BA0A1B0GVD1 139 aa15.27■□□□□ 0.03
SF1-211ENST00000448404 XPO1O14980 1071 aaKnown RBP15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms