RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 USP36Q9P275 1121 aaKnown RBP29.54■■■□□ 2.32
CBX4-202ENST00000448310 HBS1LQ9Y450 684 aaKnown RBP29.54■■■□□ 2.32
CBX4-202ENST00000448310 IGF2RP11717 2491 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 PIK3R2O00459 728 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 SYNCRIPO60506 623 aaKnown RBP29.53■■■□□ 2.32
CBX4-202ENST00000448310 OPHN1O60890 802 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 PROS1P07225 676 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 CD44P16070 742 aaKnown RBP29.53■■■□□ 2.32
CBX4-202ENST00000448310 TBXAS1P24557 533 aaPredicted RBP29.53■■■□□ 2.32
CBX4-202ENST00000448310 RGS7P49802 495 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 EIF4HQ15056 248 aaKnown RBP29.53■■■□□ 2.32
CBX4-202ENST00000448310 PLEKHG6Q3KR16 790 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 PKDCCQ504Y2 493 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 UNQ6494/PRO21346Q6UXR6 183 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 METTL3Q86U44 580 aaKnown RBP29.53■■■□□ 2.32
CBX4-202ENST00000448310 TMPRSS6Q8IU80 811 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 KCTD13Q8WZ19 329 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 KAT5Q92993 513 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 GPR174Q9BXC1 333 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 SLC2A11Q9BYW1 496 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 ITM2CQ9NQX7 267 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 WSB2Q9NYS7 404 aaPredicted RBP29.53■■■□□ 2.32
CBX4-202ENST00000448310 PCDHB4Q9Y5E5 795 aa29.53■■■□□ 2.32
CBX4-202ENST00000448310 GABBR2O75899 941 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 CALCAP01258 141 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 SETSIPP0DME0 302 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 DAOAP59103 153 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 MPPE1Q53F39 396 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 SYCP2LQ5T4T6 812 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 FOXJ1Q92949 421 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 SIPA1Q96FS4 1042 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 ZSWIM1Q9BR11 485 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 SCNM1Q9BWG6 230 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 AKAP13Q12802 2813 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 ZFHX4Q86UP3 3567 aa29.52■■■□□ 2.32
CBX4-202ENST00000448310 MUC22E2RYF6 1773 aaPredicted RBP29.52■■■□□ 2.32
CBX4-202ENST00000448310 NUMA1Q14980 2115 aa29.51■■■□□ 2.32
CBX4-202ENST00000448310 MEI4A8MW99 385 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 RNF225M0QZC1 329 aaPredicted RBP29.51■■■□□ 2.31
CBX4-202ENST00000448310 PSMA7O14818 248 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 EPHX1P07099 455 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 HLA-EP13747 358 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 ZNF132P52740 706 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 COPAP53621 1224 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 SIM1P81133 766 aaPredicted RBP29.51■■■□□ 2.31
CBX4-202ENST00000448310 CCDC40Q4G0X9 1142 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 LCLAT1Q6UWP7 414 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 SERPINA13PQ6UXR4 307 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 TIGD1Q96MW7 591 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 NT5C1BQ96P26 610 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 ADAM33Q9BZ11 813 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 METTL14Q9HCE5 456 aaKnown RBP29.51■■■□□ 2.31
CBX4-202ENST00000448310 CNGB3Q9NQW8 809 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 ABCC13Q9NSE7 274 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 MAN1B1Q9UKM7 699 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 KIAA1257Q9ULG3 409 aa29.51■■■□□ 2.31
CBX4-202ENST00000448310 CFAP47Q6ZTR5 3102 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 UPK3BL1B0FP48 263 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 UPK3BL2E5RIL1 263 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 SYPP08247 313 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 NCAM1P13591 858 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 HLA-FP30511 346 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 TPMTP51580 245 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 SGSHP51688 502 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 ARID5AQ03989 594 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 STIM1Q13586 685 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 WDR45BQ5MNZ6 344 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 KLHL10Q6JEL2 608 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 PMF1Q6P1K2 205 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 PPM1KQ8N3J5 372 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 PRCCQ92733 491 aaPredicted RBP29.5■■■□□ 2.31
CBX4-202ENST00000448310 DHTKD1Q96HY7 919 aaPredicted RBP29.5■■■□□ 2.31
CBX4-202ENST00000448310 SUSD2Q9UGT4 822 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 HOOK1Q9UJC3 728 aaKnown RBP29.5■■■□□ 2.31
CBX4-202ENST00000448310 GTF3C3Q9Y5Q9 886 aa29.5■■■□□ 2.31
CBX4-202ENST00000448310 PAEPP09466 180 aa29.49■■■□□ 2.31
CBX4-202ENST00000448310 CD59P13987 128 aa29.49■■■□□ 2.31
CBX4-202ENST00000448310 BRD2P25440 801 aaKnown RBP29.49■■■□□ 2.31
CBX4-202ENST00000448310 FAM193AP78312 1265 aa29.49■■■□□ 2.31
CBX4-202ENST00000448310 CLEC4CQ8WTT0 213 aa29.49■■■□□ 2.31
CBX4-202ENST00000448310 CYB5D2Q8WUJ1 264 aa29.49■■■□□ 2.31
CBX4-202ENST00000448310 SLC35F5Q8WV83 523 aa29.49■■■□□ 2.31
CBX4-202ENST00000448310 TMA16Q96EY4 203 aaKnown RBP29.49■■■□□ 2.31
CBX4-202ENST00000448310 CEP63Q96MT8 703 aa29.49■■■□□ 2.31
CBX4-202ENST00000448310 TMEM121BQ9BXQ6 578 aaPredicted RBP29.49■■■□□ 2.31
CBX4-202ENST00000448310 GTPBP4Q9BZE4 634 aaKnown RBP29.49■■■□□ 2.31
CBX4-202ENST00000448310 STOML2Q9UJZ1 356 aa29.49■■■□□ 2.31
CBX4-202ENST00000448310 WDR3Q9UNX4 943 aaKnown RBP eCLIP29.49■■■□□ 2.31
CBX4-202ENST00000448310 CHD6Q8TD26 2715 aa29.49■■■□□ 2.31
CBX4-202ENST00000448310 M0QYV0 167 aa29.48■■■□□ 2.31
CBX4-202ENST00000448310 HYAL3O43820 417 aaPredicted RBP29.48■■■□□ 2.31
CBX4-202ENST00000448310 GNSP15586 552 aa29.48■■■□□ 2.31
CBX4-202ENST00000448310 ADGRF1Q5T601 910 aa29.48■■■□□ 2.31
CBX4-202ENST00000448310 SCML4Q8N228 414 aa29.48■■■□□ 2.31
CBX4-202ENST00000448310 ZCCHC9Q8N567 271 aaKnown RBP29.48■■■□□ 2.31
CBX4-202ENST00000448310 ZNF366Q8N895 744 aa29.48■■■□□ 2.31
CBX4-202ENST00000448310 MIR1-1HGQ9H1L0 117 aa29.48■■■□□ 2.31
CBX4-202ENST00000448310 ABCB8Q9NUT2 735 aa29.48■■■□□ 2.31
CBX4-202ENST00000448310 DNAAF2Q9NVR5 837 aaKnown RBP29.48■■■□□ 2.31
CBX4-202ENST00000448310 TIMM44O43615 452 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms