RNA–Protein interactions for RNA: ENST00000448056.1

AC004540.1-206, humanhuman

TSL 3

Gene AC004540.1, Length 567 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-206ENST00000448056 CCDC175P0C221 793 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 PSMA2P25787 234 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ARHGAP25P42331 645 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 NOP2P46087 812 aaKnown RBP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 CXCR3P49682 368 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 SULT1E1P49888 294 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 MMP16P51512 607 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 TBX4P57082 545 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ATP11AP98196 1134 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 DEUP1Q05D60 604 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 RING1Q06587 406 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 KIF5AQ12840 1032 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 NME3Q13232 169 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 NNTQ13423 1086 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 PIGHQ14442 188 aaPredicted RBP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ACAP1Q15027 740 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 TRIP4Q15650 581 aaPredicted RBP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 C15orf59Q2T9L4 293 aaPredicted RBP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 RAB6CQ53S08 254 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ZC3H12AQ5D1E8 599 aaKnown RBP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 OTUD1Q5VV17 481 aaPredicted RBP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 HTR3DQ70Z44 454 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 MTSS1LQ765P7 747 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 STRADAQ7RTN6 431 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 DDX42Q86XP3 938 aaKnown RBP eCLIP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ADHFE1Q8IWW8 467 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 UNC45BQ8IWX7 931 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 TXLNBQ8N3L3 684 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ARFGAP1Q8N6T3 406 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 KIAA1958Q8N8K9 716 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 TDRD5Q8NAT2 981 aaKnown RBP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ST13P5Q8NFI4 369 aaPredicted RBP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ZNF564Q8TBZ8 553 aaPredicted RBP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 SH3RF2Q8TEC5 729 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ATRIPQ8WXE1 791 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 RFFLQ8WZ73 363 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 FGF14Q92915 247 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 WBP2Q969T9 261 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 NXPE3Q969Y0 559 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 E2F7Q96AV8 911 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ELSPBP1Q96BH3 223 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 RSPRY1Q96DX4 576 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 SLC39A13Q96H72 371 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 BTBD6Q96KE9 485 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 SERPINB11Q96P15 392 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 RPP25Q9BUL9 199 aaKnown RBP7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 PLA2G2FQ9BZM2 168 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 RAB6CQ9H0N0 254 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 FAM204AQ9H8W3 233 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 KIF9Q9HAQ2 790 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 PIGVQ9NUD9 493 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 DDIT4Q9NX09 232 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 OBP2AQ9NY56 170 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 CFAP97Q9P2B7 532 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 PRKAG3Q9UGI9 489 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 IP6K2Q9UHH9 426 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 SALL4Q9UJQ4 1053 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ANAPC7Q9UJX3 599 aa7.85□□□□□ -1.15
AC004540.1-206ENST00000448056 ZNF638Q14966 1978 aaKnown RBP7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 SYNJ2BP-COX16A0A087WUM0 186 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 E2F8A0AVK6 867 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 KCNU1A8MYU2 1149 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 IRAK2O43187 625 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 CCP110O43303 1012 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 RNF8O76064 485 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 KLKB1P03952 638 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 IRF1P10914 325 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 SLC2A3P11169 496 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 CCR1P32246 355 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 RDXP35241 583 aaKnown RBP7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 HARS2P49590 506 aaKnown RBP7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 ATXN1P54253 815 aaKnown RBP7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 HADHBP55084 474 aaKnown RBP7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 HDAC4P56524 1084 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 ZP2Q05996 745 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 ZNF252P-AS1Q0IIN9 211 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 HTR4Q13639 388 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 PPP2R5DQ14738 602 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 ZNF77Q15935 545 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 CDO1Q16878 200 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 NUGGCQ68CJ6 796 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 LYPD8Q6UX82 237 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 VITQ6UXI7 678 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 ZNF662Q6ZS27 426 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 SND1Q7KZF4 910 aaKnown RBP eCLIP7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 DENND1CQ8IV53 801 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 MFSD6LQ8IWD5 586 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 NIPA2Q8N8Q9 360 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 TTC16Q8NEE8 873 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 RIN3Q8TB24 985 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 BPIFB1Q8TDL5 484 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 FAM172AQ8WUF8 416 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 RSAD2Q8WXG1 361 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 RNF34Q969K3 372 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 AZIN2Q96A70 460 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 PLD4Q96BZ4 506 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 CALR3Q96L12 384 aaKnown RBP7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 FCRL2Q96LA5 508 aaPredicted RBP7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 KXD1Q9BQD3 176 aa7.84□□□□□ -1.15
AC004540.1-206ENST00000448056 DCLK3Q9C098 648 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms