RNA–Protein interactions for RNA: ENST00000448038.2

SYNE1-213, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 6,001 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-213ENST00000448038 GRAMD1AQ96CP6 724 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 B3GNT5Q9BYG0 378 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 MINDY3Q9H8M7 445 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-213ENST00000448038 TAF1P21675 1872 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 TRAV19A0A0A6YYK7 116 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 SCAMP3O14828 347 aaKnown RBP7.62□□□□□ -1.19
SYNE1-213ENST00000448038 GSTA4O15217 222 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 LZTS3O60299 673 aaPredicted RBP7.62□□□□□ -1.19
SYNE1-213ENST00000448038 CRTAMO95727 393 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 PIGRP01833 764 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 MYL2P10916 166 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 RPL21P46778 160 aaKnown RBP7.62□□□□□ -1.19
SYNE1-213ENST00000448038 MARCKSL1P49006 195 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 AMPD2Q01433 879 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 HGSNATQ68CP4 663 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 TPGS1Q6ZTW0 290 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 MFN1Q8IWA4 741 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 EPS8L3Q8TE67 593 aaKnown RBP7.62□□□□□ -1.19
SYNE1-213ENST00000448038 SCLYQ96I15 445 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 CPXM1Q96SM3 734 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 C10orf88Q9H8K7 445 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 CREBZFQ9NS37 354 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 ADAM28Q9UKQ2 775 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 CDY1Q9Y6F8 540 aa7.62□□□□□ -1.19
SYNE1-213ENST00000448038 RNASEH1O60930 286 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 HAUS5O94927 633 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 ATG7O95352 703 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 HSPA8P11142 646 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 TLE2Q04725 743 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 ENPEPQ07075 957 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 MUM1Q2TAK8 710 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 SPATA24Q86W54 205 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 FAM228AQ86W67 206 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 TMEM192Q8IY95 271 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 ATAD1Q8NBU5 361 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 JOSD2Q8TAC2 188 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 HDAC7Q8WUI4 952 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 N4BP2L2Q92802 583 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 XPO6Q96QU8 1125 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 ANKZF1Q9H8Y5 726 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 IARS2Q9NSE4 1012 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 DRG1Q9Y295 367 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 REXO2Q9Y3B8 237 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 FGF10O15520 208 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 DAB1O75553 588 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 LLGL2Q6P1M3 1020 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 LVRNQ6Q4G3 990 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 SERPINI1Q99574 410 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 ACTR5Q9H9F9 607 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 APOBEC3GQ9HC16 384 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 CD274Q9NZQ7 290 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 SUPT3HB4E1H0 165 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 SUPT3HO75486 399 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 CCL5P13501 91 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 TPH1P17752 444 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 KRT4P19013 534 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 PPIGQ13427 754 aaKnown RBP eCLIP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 POU6F1Q14863 301 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 NPNTQ6UXI9 565 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 MON1AQ86VX9 555 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 MYCBPAPQ8TBZ2 947 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 PPWD1Q96BP3 646 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 RNF157Q96PX1 679 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 PRDM16Q9HAZ2 1276 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 MRPS23Q9Y3D9 190 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 KIF3CO14782 793 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 TLR5O60602 858 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 HMOX2P30519 316 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 CSE1LP55060 971 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 JAM2P57087 298 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 TAS2R40P59535 323 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 SMARCB1Q12824 385 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 CDH17Q12864 832 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 MMRN1Q13201 1228 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 LBRQ14739 615 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 AARS2Q5JTZ9 985 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 TAPT1Q6NXT6 567 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 FUT10Q6P4F1 479 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 VSTM1Q6UX27 236 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 ANGPTL8Q6UXH0 198 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 DENND1CQ8IV53 801 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 C7orf61Q8IZ16 206 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 LPCAT1Q8NF37 534 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 FGD4Q96M96 766 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 RNF186Q9NXI6 227 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 UBA2Q9UBT2 640 aaPredicted RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 L1RE1Q9UN81 338 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 NAALADL1Q9UQQ1 740 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 RRP15Q9Y3B9 282 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 MYH7P12883 1935 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 SLX4Q8IY92 1834 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 RBAK-RBAKDNI3L0D1 243 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 EIF3HO15372 352 aaKnown RBP eCLIP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 SYNCRIPO60506 623 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 SRP72O76094 671 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 SPATA31D3P0C874 917 aa7.61□□□□□ -1.19
SYNE1-213ENST00000448038 INTS6LQ5JSJ4 861 aaKnown RBP7.61□□□□□ -1.19
SYNE1-213ENST00000448038 PLPP4Q5VZY2 271 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms